Gene Information

Name : HVO_1760 (HVO_1760)
Accession : YP_003535798.1
Strain : Haloferax volcanii DS2
Genome accession: NC_013967
Putative virulence/resistance : Virulence
Product : putative iron-III ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1628884 - 1629765 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGAACCAGCAACCAGAGAACCCCAAACAGATGGCACAACACGGCGAAACAGACGCGAATACGAGCGGAAACGAGCG
CGTCGAAAGCGACTCCGACCGCGAGAGTGCGCTCGCCGGCGACGCCCTCGAACTCTCGTATCCGACGAGCGAGGAGCCGG
TCGTCGAGTGCGACCGCATCGACATCCCGCGCGGCGAAATCACGGCGCTCGTCGGGCCGAACGGCTCCGGCAAGAGCACG
CTTCTGAAGTCGCTCGCCAAACAGCTCTCGCCCGACAGCGGCAGCGTCTACCTCGACGGGAAATCCATCAGCGAGTACGA
CGACAAGGCGTTCGCCCGCGAGTTGGGGATGCTCTCCCAACAGCACGACTCGCCCACGTCGCTCACCGTCGAGGACCTCG
TCTACCACGGCCGGTACCCCCACCGGAGCTTCTTCGAGCAGGTCAGCGACGACGACCACGAGGCGGTCGAGCGCGCCATC
GACCTCGCGGGCGTCGAGCACATCCGCGACAAGCAGATTGGCAACCTCTCGGGCGGCCAGAGCCAACTCGCGTGGATTGC
GATGGTGCTCGCACAGGACACCGACGTGCTCCTCCTCGACGAGCCGACGACGTACCTCGACTTACACCACCAGCTCCGCG
TGCTGGAGACGGTCCGCCAACTCAACGAGGAACGCGACGTGACGGTCGCGGTCGTCCTCCACGACATCGCGCAGGCCGCG
CGGTTCGCGGACTACCTCGTCGCCATGCAGGACGGCGAACTGTACGACTGGGGGCCGCCGCGCGAGGTCGTCACCGAGGA
ACTCCTCGCAGACGTGTTCCGCGTCGAGGCCGCGGTCAACTACTCGCCCGACCCGGAAATCGTCCCGAAGCGCTCGCTGT
AA

Protein sequence : 
MSNQQPENPKQMAQHGETDANTSGNERVESDSDRESALAGDALELSYPTSEEPVVECDRIDIPRGEITALVGPNGSGKST
LLKSLAKQLSPDSGSVYLDGKSISEYDDKAFARELGMLSQQHDSPTSLTVEDLVYHGRYPHRSFFEQVSDDDHEAVERAI
DLAGVEHIRDKQIGNLSGGQSQLAWIAMVLAQDTDVLLLDEPTTYLDLHHQLRVLETVRQLNEERDVTVAVVLHDIAQAA
RFADYLVAMQDGELYDWGPPREVVTEELLADVFRVEAAVNYSPDPEIVPKRSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-49 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-49 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-49 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-49 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-48 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-42 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-45 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-45 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HVO_1760 YP_003535798.1 putative iron-III ABC transporter ATP-binding protein BAC0164 Protein 8e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HVO_1760 YP_003535798.1 putative iron-III ABC transporter ATP-binding protein VFG0925 Protein 3e-51 45
HVO_1760 YP_003535798.1 putative iron-III ABC transporter ATP-binding protein VFG1042 Protein 7e-43 42