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Name : spaS1 (EAMY_0788) Accession : YP_003530146.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein SpaS Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 874314 - 875429 bp Length : 1116 bp Strand : + Note : Type III secretion protein HrpY/HrcU, FlhB HrpN YscU SpaS Family, FlhB_rel_III: type III secretion protein, YscU/HrpY family DNA sequence : ATGGCAGAAAAAACAGAAAAGCCCACGGACAAGCGGCGTAGGGATTCAGCCAAAAAAGGTCAGACCTTCAAAAGTAAAGA TCTCATTACTACTGTGACATTGCTTACGGGGGGGGGCTATCTGGCGTATGTTATGGACTTCCGTAGTTTTACCTCATTCT ATTCATTAGTTTTGCGTGAAGGGGATAAAATAAGCTTAAATGACTTTCTTACTGAATTAATGCGGGTGTTCTTGAATTTA TCACTGCCGTTTATTGCAGTTTGTACCGTCGCTGGTGCTGTAATGACGTTACTACAAACTCGTTTTTCAATCGCAACAGA AGCCATAAAACTTAATTTTGAGGCACTGGATCCTGTTAAAGGTTTAAAGAAAATATTCAGCATGCGTACGATAAAAGAGT TAGTGAAGTCAATTTTCTACCTCGTTGTTTTCATCTGTACCTGCTACAACTTGATTCATGGCGACTTAATACGGGCTGTC TCTATATATAATGGCAGTATCGAAGAACTCATTTCCGTTTGGATAACGCTAACGATTAAAGCGGTGATGGTCTTTATTGG TTGGTCAGCTTTTGTGCTTATTATTGATTTCTTTGTCGAGTATTTTTTACATTTCAAAGATATGAAAATGGATAAGCATG AGGTGAAGCAAGAGCATAAAGAGAGTGATGGCAATCCTGAAATAAAAGGTGCCAGGCGTCGTGCACATCATGAAATTCTC TCCGGAGAGGACATGGCAGCGATAAGAAACTCTGAAGTTGTTATGGCAAACCCGACCCATATCGCAATAGCCATTTACTT CAATCCTGAAGTCGCTTCATTACCTTTCATCGCCTTGCGCAGTACTAATATGAAGGCGAAAGCGGCGATTGCTTATGCAG AAAAAATAGGCATTCCCGTAGTACGATATATTCCGCTAACCCGTCGGCTATATCACACTTACAGTCAGCACAGCTTCATC TCACTTCATGATGATTCACTGATGGAAGTCATGGATATCCTTATTTGGCTGCGACAGGTTGAAACAGCTGGCATGGAGCT GCCCGCCAGCTCAGGGGTAAAAAAGGATGAAGATGCACCAGGGAGCGGCGATGAGATGCAGGACAAGCCGCTTTAA Protein sequence : MAEKTEKPTDKRRRDSAKKGQTFKSKDLITTVTLLTGGGYLAYVMDFRSFTSFYSLVLREGDKISLNDFLTELMRVFLNL SLPFIAVCTVAGAVMTLLQTRFSIATEAIKLNFEALDPVKGLKKIFSMRTIKELVKSIFYLVVFICTCYNLIHGDLIRAV SIYNGSIEELISVWITLTIKAVMVFIGWSAFVLIIDFFVEYFLHFKDMKMDKHEVKQEHKESDGNPEIKGARRRAHHEIL SGEDMAAIRNSEVVMANPTHIAIAIYFNPEVASLPFIALRSTNMKAKAAIAYAEKIGIPVVRYIPLTRRLYHTYSQHSFI SLHDDSLMEVMDILIWLRQVETAGMELPASSGVKKDEDAPGSGDEMQDKPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaU | AAS66849.1 | YsaU | Not tested | SSR-1 | Protein | 6e-92 | 56 |
| spaS | YP_217806.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 1e-48 | 42 |
| spaS | NP_461808.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 1e-49 | 42 |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 6e-50 | 42 |
| spaS | NP_806490.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 6e-50 | 42 |
| spaS | AAS66868.1 | SpaS | Not tested | SSR-2 | Protein | 9e-50 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaS1 | YP_003530146.1 | surface presentation of antigens protein SpaS | VFG1015 | Protein | 8e-48 | 43 |
| spaS1 | YP_003530146.1 | surface presentation of antigens protein SpaS | VFG0548 | Protein | 5e-50 | 42 |
| spaS1 | YP_003530146.1 | surface presentation of antigens protein SpaS | VFG1770 | Protein | 6e-61 | 42 |
| spaS1 | YP_003530146.1 | surface presentation of antigens protein SpaS | VFG2452 | Protein | 2e-58 | 41 |
