Gene Information

Name : spaR1 (EAMY_0787)
Accession : YP_003530145.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein spaR
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 873537 - 874301 bp
Length : 765 bp
Strand : +
Note : fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT

DNA sequence : 
ATGCTGTCTGTTGCGCTTTACTTGAATTTCCAGCACGGCGTGCTGATCTTTACGATGGCTTATGCAAGGTTGGCAATCGT
ATTTTATTTGCTGCCGGTGCTGGGAGAACGGGTGCTGTCTAATTTAATTATTAAGAACACGATTATTGCACTGATCATCA
TCGGTTTGTGGCCCTGCTACGCTGAAGCACTGAATCCGGAGCAGGGCTGGCTTATCTTGCTGTTAAAGGAGTGCGTCATA
GGATTAATACTGGCTATGACGTTATGTGTTCCTTTTTGGATTGTCATTAGTCTTGGCGAAATACTTGATAACCAACGTGG
TGCAACCATTAGTGATAGTATTGACCCAGTTAATGGGGTGCAAAGCTCTACATTATCTGGTTTTCTAAACTTTGCTTTTG
GCGCCATTTTTTTTGCCAGTGGCGGCATGAGTTCACTCATAGAATTATTGGTACAGAGCTATCACGTTTTTCCAAGGGGC
AGTAATTTAGTCGATTTCCATTGGCAAGCGGTGGGGGGGTTATTAATGGTGCTTGCTAAGGGGAGCATCATGCTTTCCGC
TCCGGTAATGATAGTCATGATGGTGGCGGAAATATTACTGGGTGTTTTCGCACGTTTTTGTCCGCAGTTAAACCCCTTTT
CTCTTTCCTTAGCAATAAAAAGTTTCATTGCGTTTACTGTTTTCCTTTTTTACGGTTTTCAGGCTATCTCGCAAAAACCT
TTGCACCTTTTCTCTATTGCTTTTTTTCAGCAATTTTTTCTTTGA

Protein sequence : 
MLSVALYLNFQHGVLIFTMAYARLAIVFYLLPVLGERVLSNLIIKNTIIALIIIGLWPCYAEALNPEQGWLILLLKECVI
GLILAMTLCVPFWIVISLGEILDNQRGATISDSIDPVNGVQSSTLSGFLNFAFGAIFFASGGMSSLIELLVQSYHVFPRG
SNLVDFHWQAVGGLLMVLAKGSIMLSAPVMIVMMVAEILLGVFARFCPQLNPFSLSLAIKSFIAFTVFLFYGFQAISQKP
LHLFSIAFFQQFFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaT AAS66848.1 YsaT Not tested SSR-1 Protein 1e-54 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaR1 YP_003530145.1 surface presentation of antigens protein spaR VFG2453 Protein 4e-37 46
spaR1 YP_003530145.1 surface presentation of antigens protein spaR VFG1771 Protein 9e-31 41