|
Name : invA1 (EAMY_0779) Accession : YP_003530137.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : type III secretion apparatus protein InvA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 866544 - 868541 bp Length : 1998 bp Strand : + Note : type III secretion apparatus InvA, FHIPEP family, HrcV/FlhA family DNA sequence : ATGATAGTAGTCATGCTTATTATTCCGTTGCCGACCTATATTGTCGATTTTCTGATTGGTCTTAATTTGACCATGGCGTT ATTGATTTTCCTTGGCTCATTTTATATTAATCGCGTTCTTGATTATTCGACGTTTCCGTCAATTCTCCTGATTAGTACGA TTTTCAGACTGGCCATTTCTATCAGCACCAGCAGACTGGTACTTACTGATGCCGATGCCGGAGAAATTATTACCAGCTTT GGTGAGTTCGTTATCGCTGATAATATGGTTGTGGGCTTCGTTATTTTCTTCATCGTCACGGTTGTTCAGTTTATCGTGAT TACCAAAGGATCTGAACGTATTGCAGAAGTTGCCGCTCGTTTCTCTCTGGATGCTATGCCCGGTAAGCAGATGAGTATTG ATGCTGATCTTAAAGCCGGCGTGATTAATGAAAAAGAAGTGAAGCGGCGTCGAAGTGACCTGGAAGCCGAAAGCCAGCTT TACGGTGCGCTGGATGGTGCGATGAAGTTTATCAAAGGTGATGCCATCGCTGGGATAATTATCATCTTCGTCAACTTTCT GGGTGGGATCTCAGTCGGGGTTTTCCAGCAAGGCATGGATGTATCTCATGCTATGTCGGTCTTTACGTTGCTAACCATCG GTGATGCTCTGGTAGCTCAGATACCGGCATTACTGATCTCAATCAGTGGCGGCCTGATTGTTACCCGTGTGAATAACAGT GATAACAATAATCTGGGATCAAAAATCCTGCAGGATATGCTTTCTAACAAGTCTATTCTGCTAATCACAGCTTTTCTCGC TATTGCACTAGGGCTGCTGCCTGGTTTTCCTTTGCCCGTATTCATCTTATTGGCAATCCCCCTTTTGGGAATGTTCGTAA AACACAAATTTGATGAGAAGAATAAAATTGTTAAAGCGGGAGAAGAAAATCTTCAAGATGATGATCAGCCGGTGCTGAAG AGCAAGCCAGTTATTATTGATGGTGAGTACATTCCAGAAACTATCCCGCTTATCATCACCGCCTGGAAAGGATATGAACA ATATTTCCAGGAACATAATTTTACATCGTTATTTAAACGTAATTTCTTCGTAGAATATGGTGTTCGCCTGCCGGAAGTTT TAATGAATTATGAAGAGAGCGCCCCGCGCGGCATTCTGACGGTAGCCATTAATGAAATACAGGTGGCATCTTACAATATA TTTCCGGGCATGTGTAAGGTATTAATGCAGGGTGAGGAACTTCAGGTGATTGATGCCAGCGTTCAGACGATTGCATCCCC ACAGGGAAACGTCTATTGGCTACCTGAGGAACGGAATGAGAAAGCCATCCAGCTGGGGTATCATACAAGAAACGCGATAG ATGAGTTTTACGCATGTGTTTCTACTTTGCTTGTTCATAATATCTCAGAATTTTTTGGTATTCAGGAGACCAAAACGCTG CTTGATGACCTTGAAAAGAAATATCCCGATCTTCTTAAGGAATGCTACCGTAATAACACCGTCCAACGTATTACGGAAGT CTTTCAGAGGCTCCTTCAGGAACGTATCTCAATCAGAAATATGCGACTAATTCTGGAAGCGTTGGTGCAATGGGCTCCAA AAGAGAAAGATCCGATTATGTTAGTCGAGCACGTCAGAGGGGTTTTGGCCCGGTACATCTCTAACCGCTTTGCTTTTCGT GGACGTATAAGAACGTTGGTTATGTCACATGATATGGAAAATATGATTCGCGGTGCGCTAAGGCAAACCTCATCGGGTAC TTTTATAAATTTACCACCACCGCAAATTGAAAGTGTAAATAAATGTCTGGAAGAAGTTCTTCAACTCAATGGTGTTAATG CTCGGGATATCATCTTGATGGTGTCAATGGATATCAGGCGTTTCGTTAAGAAAATTACCGAGGGAAATAACCCTGAGATG GAAGTGCTTTCTTACGGTGAGATTTCTACCGGTGTAGAAGTGGATGTTATAGGCTCTTTAGAAAATAATCAGGTGTAA Protein sequence : MIVVMLIIPLPTYIVDFLIGLNLTMALLIFLGSFYINRVLDYSTFPSILLISTIFRLAISISTSRLVLTDADAGEIITSF GEFVIADNMVVGFVIFFIVTVVQFIVITKGSERIAEVAARFSLDAMPGKQMSIDADLKAGVINEKEVKRRRSDLEAESQL YGALDGAMKFIKGDAIAGIIIIFVNFLGGISVGVFQQGMDVSHAMSVFTLLTIGDALVAQIPALLISISGGLIVTRVNNS DNNNLGSKILQDMLSNKSILLITAFLAIALGLLPGFPLPVFILLAIPLLGMFVKHKFDEKNKIVKAGEENLQDDDQPVLK SKPVIIDGEYIPETIPLIITAWKGYEQYFQEHNFTSLFKRNFFVEYGVRLPEVLMNYEESAPRGILTVAINEIQVASYNI FPGMCKVLMQGEELQVIDASVQTIASPQGNVYWLPEERNEKAIQLGYHTRNAIDEFYACVSTLLVHNISEFFGIQETKTL LDDLEKKYPDLLKECYRNNTVQRITEVFQRLLQERISIRNMRLILEALVQWAPKEKDPIMLVEHVRGVLARYISNRFAFR GRIRTLVMSHDMENMIRGALRQTSSGTFINLPPPQIESVNKCLEEVLQLNGVNARDIILMVSMDIRRFVKKITEGNNPEM EVLSYGEISTGVEVDVIGSLENNQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaV | AAS66840.1 | YsaV | Not tested | SSR-1 | Protein | 0.0 | 68 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 9e-139 | 53 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 9e-139 | 53 |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 9e-139 | 53 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 9e-139 | 53 |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 5e-134 | 53 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 2e-123 | 50 |
| escV | NP_290269.1 | hypothetical protein | Virulence | LEE | Protein | 1e-83 | 41 |
| escV | CAC81861.1 | EscV protein | Virulence | LEE II | Protein | 6e-85 | 41 |
| ECs4569 | NP_312596.1 | hypothetical protein | Virulence | LEE | Protein | 1e-83 | 41 |
| escV | AAC31514.1 | L0035 | Virulence | LEE | Protein | 9e-84 | 41 |
| escV | YP_003232152.1 | T3SS structure protein EscV | Virulence | LEE | Protein | 2e-84 | 41 |
| escV | ACU09459.1 | EscV protein | Virulence | LEE | Protein | 9e-84 | 41 |
| escV | YP_003223476.1 | translocator EscV | Virulence | LEE | Protein | 1e-84 | 41 |
| escV | AAC38382.1 | EscV | Virulence | LEE | Protein | 7e-84 | 41 |
| escV | YP_003236089.1 | putative translocator EscV | Virulence | LEE | Protein | 7e-85 | 41 |
| escV | AAK26714.1 | EscV | Virulence | LEE | Protein | 1e-84 | 41 |
| escV | AAL57541.1 | EscV | Virulence | LEE | Protein | 1e-84 | 41 |
| escV | CAI43875.1 | EscV protein | Virulence | LEE | Protein | 9e-85 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| invA1 | YP_003530137.1 | type III secretion apparatus protein InvA | VFG1780 | Protein | 4e-151 | 55 |
| invA1 | YP_003530137.1 | type III secretion apparatus protein InvA | VFG0557 | Protein | 4e-139 | 53 |
| invA1 | YP_003530137.1 | type III secretion apparatus protein InvA | VFG1006 | Protein | 1e-123 | 50 |
| invA1 | YP_003530137.1 | type III secretion apparatus protein InvA | VFG0729 | Protein | 4e-84 | 41 |
| invA1 | YP_003530137.1 | type III secretion apparatus protein InvA | VFG0813 | Protein | 5e-84 | 41 |
