Gene Information

Name : hpa2 (EAMY_0769)
Accession : YP_003530127.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : protein IpgF
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 857417 - 857920 bp
Length : 504 bp
Strand : -
Note : Lytic transglycosylase-like, catalytic, Transglycosylase SLT domain

DNA sequence :
ATGTTCACGAAAATGAATGTTGTTTTTATTTCCATCCTGTTGACCCTGTTCTCTCCATTCGCATCATCTCAGCAGGGAGA
CTGCATTGATGAGGCAGCGTTATGCTTTCAAATAAATCCCCTGTTGATTAAAGCTATCATCTGGCAAGAATCAAAAAATC
AACAAAACGCTATCACCAGGAATAAAAACAACACGGTTGACGTTGGTGTTATGCAGGTCAATAGTATCCATTTCAACACT
CTGAAAGGGATGGGGATCACCGAGCAGGCGCTACGTGAAAACAGTTGCGCAAATGTTTTTTCAGGAACGTGGATACTCCG
CCAGGTTATCGATCGTCATGGCTATACCTGGGATGGTATAGGAAGGTATCACTCAAGCACCCCCGTTTATCATGATAAAT
ACGTCAAAAATATCGTATCTATTATTGCCTACAAGTCTCATAAAATTGAAAAGCTGATAATCGCCCGTCAGAATGGTATT
CGTGATAAATTCTCATGCAAATAA

Protein sequence :
MFTKMNVVFISILLTLFSPFASSQQGDCIDEAALCFQINPLLIKAIIWQESKNQQNAITRNKNNTVDVGVMQVNSIHFNT
LKGMGITEQALRENSCANVFSGTWILRQVIDRHGYTWDGIGRYHSSTPVYHDKYVKNIVSIIAYKSHKIEKLIIARQNGI
RDKFSCK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 2e-22 46
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 3e-22 46
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 9e-22 46
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 2e-21 45