Gene Information

Name : pagC (EAMY_0669)
Accession : YP_003530027.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : Virulence membrane protein pagC
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3637
EC number : -
Position : 742720 - 743277 bp
Length : 558 bp
Strand : -
Note : Virulence-related outer membrane protein, Enterobacterial Ail/Lom protein

DNA sequence : 
ATGAATGTAAAAATTATGGCAATTGTTTTAGCCTTTAGCGCTCTGCCGGCCAGCTTGTTGGCGCGTGCAGACAGCCATGC
TCTGTCAATCGGCTATGCGCAAAGCCGGGTGCAGGATTTTAATAATCTGCGAGGTGTTAACGTCAAGTATCGCTATGAGC
CGGAATCTTTGCTCGGCGTCATCACGTCATTCAGCTATATGTCTGCTGGAGGAAACGTGTTTGATTCGTCCAGTTGGGAG
GACACGTATTACGACGATAGTGTAAAAGTAAAATACTTTTCGTTGCTTGTTGGTCCGGCTTACCGTATTAACAAACATGT
TTCACTTTATGCCGTTGGTGGTATAAGTAACGGTAAATCCGCTCTGACACAGAACTACCGCCATAGTAATTATACATATA
CTGAAAATTCGACTGATAACACGACTTCATTAGCTTATGGTGCTGGTGTTCAGATTAACCCTCTGGAAAACATTGTCCTC
GATATTAGCTATGAAGGAAGTAAACTGCAGCAAACAAAAATCAACGGCTTTAGTATGGGTATTGGCTATCATTTCTGA

Protein sequence : 
MNVKIMAIVLAFSALPASLLARADSHALSIGYAQSRVQDFNNLRGVNVKYRYEPESLLGVITSFSYMSAGGNVFDSSSWE
DTYYDDSVKVKYFSLLVGPAYRINKHVSLYAVGGISNGKSALTQNYRHSNYTYTENSTDNTTSLAYGAGVQINPLENIVL
DISYEGSKLQQTKINGFSMGIGYHF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 9e-33 49
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 2e-26 42
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 1e-26 42
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 6e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pagC YP_003530027.1 Virulence membrane protein pagC VFG0442 Protein 2e-31 44