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Name : lysS (EAMY_0659) Accession : YP_003530017.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 732415 - 733935 bp Length : 1521 bp Strand : + Note : Lysyl-tRNA synthetase (Lysine-tRNA ligase) (LysRS) DNA sequence : ATGTCTGAACAACAACCGCAGGCCCCGGACGCCGCACTTGAGCTGAACAACGAATTGAAAGCGCGGCGCGAAAAGCTGGT GGCTCTGCGCGCAGCCGGCGTGGCGTTCCCCAACGATTTCCGTCGCGATCGCACCTCTGACCAGCTGCACGCCGCATTTG ACGGCAAGGAGAACGAAGAGCTGGTAGAGCTGGGTATAGAAGTCAGCGTTGCGGGCCGTATGATGACGCGTCGTATTATG GGCAAAGCCTCTTTCGTCACCTTACAGGATGTAGGCGGCCGCATTCAGCTGTACGTGTCCCGTGACGATCTGGCGGAAGG CATCTATAACGAGCAGTTCAAAAAGTGGGATCTCGGCGATATCCTCGGCGCACGCGGTAAGTTGTTCAAGACCAAAACCG GCGAGCTGTCGATCCACTGTAGCGAACTGCGTCTGCTGACCAAAGCGCTGCGTCCGCTGCCGGATAAGTTCCACGGCCTG GCGGATCAGGAAACCCGCTACCGTCAGCGTTATCTCGACCTGATTGCTAATGACGATTCACGCAACACGTTTAAAGTTCG CTCGCAGATTATGGCCGGTATCCGCAACTTTATGGTGGGCCGCGACTTTATGGAAGTGGAAACCCCGATGATGCAGGCGA TCCCGGGCGGCGCGTCTGCCCGGCCGTTTATCACTCATCACAATGCGCTGGATCTTGATATGTACTTGCGTATTGCCCCG GAGCTGTATCTGAAGCGTCTGGTGGTGGGCGGTTTCGACCGCGTGTTCGAAATCAACCGTAACTTCCGTAACGAAGGTAT TTCGCCGCGGCATAACCCGGAGTTCACCATGATGGAACTCTACATGGCGTATGCTGACTACGAAGATTTGATCGAACTGA CCGAAAGCCTGTTTCGTACGCTGGCGCAGAACGTGCTGGGCAGTACCTTAGTGCCTTATGGCGACCAGCAGTTTGACTTT GGTCAGCCCTTCGCAAAACTGACGATGAAAGAAGCGATACTGAAATATCGTCCGCAGACCGATCTGGCCGATCTGGCCGA CTTCGATAAATCAGTCGCCATCGCCCAGTCGCTGGGGATTAACGTTGAGAAGAGCTGGGGGCTGGGCCGCGTGGTGACCG AGATCTTCGAAGAAACCGCGAAAGAACATCTGATCCAGCCAACCTTTATTACCGAATATCCGGCTGAAGTCTCTCCGCTG GCGCGTCGTAACGATGTCGATCCTGAAATCACTGACCGCTTTGAGTTCTTTATCGGTGACCGTGAAATTGGTAACGGTTT CTCAGAGCTTAACGATGCACAGGACCAGGCGGAACGTTTCCTGCAGCAGGTGAATGCCAAAGACGCGGGTGACGATGAAG CGATGTTCTACGACGAAGATTACGTGACCGCGCTGGAGCATGGCCTGCCGCCAACCGCCGGTTTAGGCATCGGCATCGAC CGTATGGTGATGCTGTTTACCAACAGCCATACTATCCGCGATGTGATCCTGTTCCCGGCGCTGCGCCCGGGCAGCAAGTA G Protein sequence : MSEQQPQAPDAALELNNELKARREKLVALRAAGVAFPNDFRRDRTSDQLHAAFDGKENEELVELGIEVSVAGRMMTRRIM GKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLFKTKTGELSIHCSELRLLTKALRPLPDKFHGL ADQETRYRQRYLDLIANDDSRNTFKVRSQIMAGIRNFMVGRDFMEVETPMMQAIPGGASARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYEDLIELTESLFRTLAQNVLGSTLVPYGDQQFDF GQPFAKLTMKEAILKYRPQTDLADLADFDKSVAIAQSLGINVEKSWGLGRVVTEIFEETAKEHLIQPTFITEYPAEVSPL ARRNDVDPEITDRFEFFIGDREIGNGFSELNDAQDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPALRPGSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-170 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003530017.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-170 | 69 |
