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Name : hrcU (EAMY_0525) Accession : YP_003529883.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : type III secretion protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 601953 - 603035 bp Length : 1083 bp Strand : - Note : FlhB_rel_III: type III secretion protein, YscU/HrpY family DNA sequence : TTGGCAGAAAAAACGGAAAAACCCACGGCGAAAAAGCTACAGGATGCGCGCCGCAAAGGTCAGGTCCCGCAAAGCCAGGA TGTGCCGAAGCTGCTGATTTGCGCCGGGGTGGTGGAAACCGTGCTGGCGCTGGACGATGTCGGTATGCAAAAGCTTCAGG CGCTGATGATGCTGCCGCTGGCGCGGATTGGTCAGCCCTTTGAACTGGCGTTAAGCGAGGTGGTGAGCAGCGCCATAATA CTGGTGGCGACTTTCTGCGGCCTGACGGTGGCGATAGCGGCGCTGCTGCGCATCATCGGTGGCTGGATCCAGTACGGCCC GCTGTTTGCCCCGGAGGCGCTGCAGCCGGATTTCAACCGCCTGAACCCGATCAATCAGTTCAAGCAAATGTTTTCCGTAA AAAAACTCAGTGAAATGCTTAACAGCATCGTGAAGGCCGTGGCCATCTGCACCATTTTTTATCTGGTGCTGACGCCGGAC CTCGAATCACTGTCCCGTCTGGCTTATGGCGATCTCGACAGCTTCTGGCCCGCCGTAGAAACGCTGTTGATCCACGTTTC TCGCCAGACGCTGCTGACATTGCTGGTACTGACGCTGCTGGACTTCGGCCTGCAAAAATACTTTTTCATCAAACAGCAGC GCATGAGCCATCAGGACATTCGCGATGAACACAAACAGTCCGAAGGCGATCCGCATATGAAAGGCCACCGTCATGCGCTG GCGCATGAGCTGCTTAATCAGCCGGCGACGGCGGTCAAGAGCAAGCCGGTAGAAGAAGCCGACCTGCTGCTGGTCAATCC CACGCACTATGCGGTTGCGCTCTATTATCGCCCGGAGCTGACCCCGCTGCCGCGTATTATTTGTAAGGGGGAGGATCAGC AGGCTAAAGAGCTGATTGCCCGCGCGCAGCAGGCCAATATCCCGGTTATCCGCTTTATCTGGCTGGCGCGCACGCTTTAC CGCTCCCAGGAGGGGCAGCTGATCCCACGCCATACGTTGCAGGCGGTAGCCCAGGTTTACCGCGTGCTGCGTCAGCTGGA AGACCAGATAACCGATGAGGTGATCGAACTGGAAGCCGAATAA Protein sequence : MAEKTEKPTAKKLQDARRKGQVPQSQDVPKLLICAGVVETVLALDDVGMQKLQALMMLPLARIGQPFELALSEVVSSAII LVATFCGLTVAIAALLRIIGGWIQYGPLFAPEALQPDFNRLNPINQFKQMFSVKKLSEMLNSIVKAVAICTIFYLVLTPD LESLSRLAYGDLDSFWPAVETLLIHVSRQTLLTLLVLTLLDFGLQKYFFIKQQRMSHQDIRDEHKQSEGDPHMKGHRHAL AHELLNQPATAVKSKPVEEADLLLVNPTHYAVALYYRPELTPLPRIICKGEDQQAKELIARAQQANIPVIRFIWLARTLY RSQEGQLIPRHTLQAVAQVYRVLRQLEDQITDEVIELEAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | AAB06008.1 | HrcU | Virulence | Hrp PAI | Protein | 5e-164 | 100 |
| hrcU | AAT96265.1 | HrcU | Virulence | S-PAI | Protein | 3e-101 | 60 |
| hrcU | AAT96306.1 | HrcU | Virulence | S-PAI | Protein | 2e-101 | 60 |
| hrcU | AAT96346.1 | HrcU | Virulence | S-PAI | Protein | 2e-98 | 60 |
| hrcU | ABA47282.1 | HrcU | Virulence | S-PAI | Protein | 1e-99 | 59 |
| hrcU | AAT96149.1 | HrcU | Virulence | T-PAI | Protein | 4e-87 | 54 |
| hrcU | AAT96203.1 | HrcU | Virulence | T-PAI | Protein | 4e-87 | 54 |
| hrcU | AAG33887.1 | HrcU | Virulence | Hrp PAI | Protein | 4e-68 | 53 |
| hrcU | ABQ88362.1 | HrcU | Virulence | Hrp PAI | Protein | 5e-84 | 53 |
| hrpY | AAB05078.1 | HrpY | Virulence | Hrp PAI | Protein | 5e-84 | 53 |
| hrcU | NP_791219.1 | type III secretion protein HrcU | Virulence | Hrp PAI | Protein | 5e-80 | 53 |
| hrcU | AAC35808.1 | hrp type III pathway protein | Virulence | Hrp PAI | Protein | 5e-72 | 51 |
