Gene Information

Name : EAMY_3228 (EAMY_3228)
Accession : YP_003532581.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : type VI secretion system core protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3324851 - 3325348 bp
Length : 498 bp
Strand : -
Note : type VI secretion system, core protein COG3516: Uncharacterized protein conserved in bacteria Protein of unknown function (DUF770)

DNA sequence :

ATGTCTAACTCCTGGCAGTCCGAGATCCCCAAGGCTCGCGTTAACATTCAGTTAAGTCTGCACACGGGTGGCGCGCAGAA
AAAAGTGGAATTACCCCTCAAGTTGATGGTGGTAGGCGATTACAGCAACGGCGCTGAACAGCGTGCGGTATCTGAGCGTG
AACCTGTCAGCGTCGATAAAAACAACTTCAACAGCGTGCTGTCCGAATTCTCTCCCTCCCTGGATATTTCCGTGGAAAAC
ACGCTGGCGGGTGACGGCAGTGAAGAAAATGTCAGCCTCTCTTTCGGTGAGATGAAAGACTTCGGGCCGGAGCAGGTAGC
CCGCCAGATACCCCAGCTCAAAGCCATGCTGGCCATGCGCAATCTGCTTCGCGACCTGAAAGCAAACCTGCTGGACAACG
TGACCTTCCGCAAGGAGCTGGAAAAAATCCTGCTTGACCCAACGCTCAGTGCTGAACTGCGCAGCGAGCTGTCTGCCCTG
GCACCGAAAAACGCCTGA

Protein sequence :

MSNSWQSEIPKARVNIQLSLHTGGAQKKVELPLKLMVVGDYSNGAEQRAVSEREPVSVDKNNFNSVLSEFSPSLDISVEN
TLAGDGSEENVSLSFGEMKDFGPEQVARQIPQLKAMLAMRNLLRDLKANLLDNVTFRKELEKILLDPTLSAELRSELSAL
APKNA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
HH0248	NP_859779.1	hypothetical protein	Not tested	HHGI1	Protein	2e-21	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
EAMY_3228	YP_003532581.1	type VI secretion system core protein	VFG2092	Protein	3e-23	44