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Name : clpV3 (EAMY_3222) Accession : YP_003532575.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : type VI secretion system core protein ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3316218 - 3318878 bp Length : 2661 bp Strand : - Note : type VI secretion system, core protein COG542: ATPases with chaperone activity, ATP-binding subunit ATPase family associated with various cellular activities (AAA) DNA sequence : ATGGAACACCGGTCAGCCATCTTACTTCGTCGCTTAAACCCGTACTGTGCAAAAGCGCTGGAAGCCGCCGCCACCCTGTG TCAGACGCGAGCGCACGCACAAATCACCATTGAGCACTGGCTACTCAAGCTGCTGGAAATGGGCGAGGGTGACATCACCG TGCTGGCTCGCCGCTACGAATGGGATATGGATGCACTGTGGCAGAGTTTGCTGTCACATCTTGATGCTTTGCCGCGCTCG GTATATTCCCGCCCACCGCTCTCCGATGACATGCAGGCGCTGATGGAAGCCGCCTGGCTGGTGGCGTCATTAGAAGATAA TAACCAGACTATCCGCAGTGTAAACCTGCTGGAGGCGCTGATGACCAGGCCGAAGCTGCTGCGCTGCGACGATCTGTGGC CGCTGTTCAGCCTCAGTGAGTCACAAATCAGCCGCCTGAAACCGCTGCTGGATGCGCAATCCGATGAACGCCCTGAACGG CAACAGCAGGAACGTCTGGGTCAAATGCCCTTCACGCTGGGTGAAGAAACGGCACAGGATAGCGGTATTTCTGGCAATCA TTTAAGCGATGCGCTTCAGGCCGCGCTGGACAAATTCACGCTGGACGTGACCGCTAAAGCCAGAGCCGGGCAGATTGATC CGATATTTGGCCGCGACAACGAAATCCGCCAGATGGTGGATATTCTCTCCCGTCGTCGCAAAAACAACCCCATCTTAGTC GGCGAACCGGGCGTCGGGAAAACGGCGCTAATCGAAGGCCTGGCGCTCCGCATCAGCGAGGGTAACGTGCCGGACAGCCT GAAAAACGTCAGTCTGCGCACGCTGGATATGGGGCTGCTGCAGGCCGGGGCGGGTGTGAAGGGCGAATTCGAACAGCGTC TTAAAAACGTCATCGACGCGGTGCAGAACTCGCCGACGCCGGTTTTACTGTTTATCGACGAAGCGCACACCCTGATCGGT GCCGGCAATCAGGCGGGGGGAGCGGATGCGGCCAACCTGCTTAAACCCGCTCTCGCCCGTGGCGAACTGCGTACTATTGC GGCGACCACCTGGTCCGAGTACAAGCAGTATTTTGAGCGCGATGCCGTCCTGGAACGCCGCTTTCAGAGGGTTAAAGTCG ATGAGCCTGATGAGCAGACGGCCTGCCTGATGCTACGTGGCCTGAAGTCCCGCTACGCCCGGCACCACGGTGTGCACATT ACCGATGAAGCGGTGAAAGCCGCCGTCAGCCTGTCGCGCCGCTACATCCCCGGTCGTCAGTTGCCGGACAAAGCCGTTGA CCTGCTGGATACCGCCTCCGCCCGGGTGCGCATGAGCCTTGATACCCTGCCGGAAGAGTTGACCCGCCTGAAAGCGCAAA TCACCGCGCTGGATATGGAAGCGCAGGCGCTGCGTGAAGATACCGCGCTAAGAAACCATCCCCACGGCGACCGCCTGGCA CAGATTGAGCAACAGACGAATGCGCTTGGCGACCAGCTTGCGCAATTTGACATGCAGTATCTTGCCGAAAAAGCCCTGAC CCGGCAACTGCTGGAAGTGCGCCAGGACAGCAACCGTCAGGAAGATAGTATTGGACTGCAACAGCAACTGAGCGATTTGC AGGGCAGTGCACCCTTGATGAGCATTGATGTGGACGTGCGCACCGTGGCCACCGTAATTGCCGACTGGACCGGCGTTCCA CTGACCAGCCTGCTGAAGGATGAACAGACCGACCTGCTGCAGCTGGAAAGCCATCTGGGTCAGCGCGTCGTCGGGCAAGA GCACGCCCTTATCGACCTGGCCCGGCGGCTGCGCGCCGCCAAAACCGGACTCACTTGCGGAAACGGCCCGCTGGGCGTGT TCCTGCTGGTGGGGCCGAGCGGGGTGGGTAAAACCGAGACGGCGCTTTCATTGGCCGATTGCCTGTTTGGCGGAGAAAAG TCCCTCATCACCATCAACATGTCTGAGTACCAGGAAGCGCATACCGTTTCCCAGCTCAAAGGTTCGCCTCCTGGCTACGT CGGTTACGGTCAGGGCGGCATTCTCACCGAGGCGGTGCGCAAGCGCCCGTACAGCGTGGTGCTGCTTGATGAAGTGGAAA AAGCCCATACGGACGTGATGAACCTGTTTTATCAGGTTTTCGACCGTGGCTTTATGCGGGACGGGGAAGGGCGCGAAATC GACTTTCGCAACAGCGTCATTCTGATGACGGCCAATCTGGGCAGTGACCATCTGATTCAGCTGCTGGACGAACGGCCGGA AGCGACCCACGGCGATTTGCATGCGCTGCTGCGCCCGATATTGCGCGACCACTTCCAGCCCGCCCTGCTGGCCCGTTTCC AGACGCTGATCTACCGTCCGCTGGACGCCAGTGCACTGCGCACCGTTGTCAAAATGAAACTGGCCCAGGTCGCCAAACGT CTGAACACACATTATGGCCTGCATTGCACCATCGGGGAGAGCCTCTACGACATCCTGATCGCTGCCTGCCTGCTGCCGGA TACCGGCGCACGCAACATCGACAGCCTGCTCAATCAGCAGATTTTACCGGTACTGAGTCAGCAGTTATTAAGCCTGATGG CGGCTAAGCAGAAGCCGTCCTCCCTACAGCTTTCCTGGGATGATGCAGAAGGCATTGTACTGGCGTTTGATTCGGTATCG GCGAAGTCAGATAAAACCTAA Protein sequence : MEHRSAILLRRLNPYCAKALEAAATLCQTRAHAQITIEHWLLKLLEMGEGDITVLARRYEWDMDALWQSLLSHLDALPRS VYSRPPLSDDMQALMEAAWLVASLEDNNQTIRSVNLLEALMTRPKLLRCDDLWPLFSLSESQISRLKPLLDAQSDERPER QQQERLGQMPFTLGEETAQDSGISGNHLSDALQAALDKFTLDVTAKARAGQIDPIFGRDNEIRQMVDILSRRRKNNPILV GEPGVGKTALIEGLALRISEGNVPDSLKNVSLRTLDMGLLQAGAGVKGEFEQRLKNVIDAVQNSPTPVLLFIDEAHTLIG AGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAVLERRFQRVKVDEPDEQTACLMLRGLKSRYARHHGVHI TDEAVKAAVSLSRRYIPGRQLPDKAVDLLDTASARVRMSLDTLPEELTRLKAQITALDMEAQALREDTALRNHPHGDRLA QIEQQTNALGDQLAQFDMQYLAEKALTRQLLEVRQDSNRQEDSIGLQQQLSDLQGSAPLMSIDVDVRTVATVIADWTGVP LTSLLKDEQTDLLQLESHLGQRVVGQEHALIDLARRLRAAKTGLTCGNGPLGVFLLVGPSGVGKTETALSLADCLFGGEK SLITINMSEYQEAHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHTDVMNLFYQVFDRGFMRDGEGREI DFRNSVILMTANLGSDHLIQLLDERPEATHGDLHALLRPILRDHFQPALLARFQTLIYRPLDASALRTVVKMKLAQVAKR LNTHYGLHCTIGESLYDILIAACLLPDTGARNIDSLLNQQILPVLSQQLLSLMAAKQKPSSLQLSWDDAEGIVLAFDSVS AKSDKT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-145 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV3 | YP_003532575.1 | type VI secretion system core protein ATPase | VFG2076 | Protein | 1e-163 | 45 |
| clpV3 | YP_003532575.1 | type VI secretion system core protein ATPase | VFG2084 | Protein | 3e-136 | 44 |
| clpV3 | YP_003532575.1 | type VI secretion system core protein ATPase | VFG0079 | Protein | 8e-112 | 41 |
