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Name : srlQ (EAMY_3070) Accession : YP_003532423.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : phosphosugar isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 3161861 - 3162826 bp Length : 966 bp Strand : - Note : probable phosphosugar isomerase DNA sequence : ATGCGCGAGAAATTATTGCAGGCCGCACGGGAAACCATTGCGACGGAACTGAGCGGCGCGATGAACCTGGCTGCGAGGCT GGACGATCATTTTGTGCAGGCGTGTGAAATGATGCGGGCATGCAGGGGAAAAGCGATCGTCAGTGGGATTGGCAAATCCG GGCATATCGGCAAAAAAATCGCCGCGACGTTGGCCAGTACCGGCACCCCGGCTTTTTATGTCCACCCTGCTGAAGCGCTG CACGGCGATCTGGGCATGATTGCCGCCGGGGACGTGGTCATACTTATCTCTTACTCTGGTTTTGCCGCCGAATTTATTCG CATGGTTCCCATGCTCAAGCGCTTACCGGTGGGCATTATTGCTTTTACCGGCAAACCCACCTCGCCTTTGGCAATGGCCG CCGACCAGGTTATCAACATCCATACCGATCGCGAAGCCTGTCCGTTAGGGCTTGCTCCAACCTCATCTGCGGTAAATACC TTGATCATGGGTGATGCGCTGGCTATTGCCTTAATGCGCAGTCGCAACTTCAGCGAGCATGATTATGCCCGTACGCACCC CGGCGGCAGCCTGGGCACCCGCCTGCTGTGCTGCGTGGGGGATATTATGCGCAAAGGGGAGAAACTACCGCGCATCACGC GTGATGTCACCGTCGGTGACGCTCTGGCCGAACTGACCCGTACCGGGCTGGGTTTAGTGGCGGTGACCGACGATGCAGGC GTACTGATCGGGGTATTTACCGACGGCGATCTGCGGCGCTGGCTGCACAAGGGCGAGAATATCCAGGCCGGTATTTCGCG TGTGATGACGGTTGGCAGTAAAACCCTGAACGCCGGTCAGCTGGCGACCGAAGCGCTGGCCATGTTCCATGAGCAGAAAA TTTCCGCCGCCCCGGTGGTTGATGAGCAAGGACGGGTAACCGGGGCCATCAATTTGCACGATATTCATGATGCGGGGATT TTCTAA Protein sequence : MREKLLQAARETIATELSGAMNLAARLDDHFVQACEMMRACRGKAIVSGIGKSGHIGKKIAATLASTGTPAFYVHPAEAL HGDLGMIAAGDVVILISYSGFAAEFIRMVPMLKRLPVGIIAFTGKPTSPLAMAADQVINIHTDREACPLGLAPTSSAVNT LIMGDALAIALMRSRNFSEHDYARTHPGGSLGTRLLCCVGDIMRKGEKLPRITRDVTVGDALAELTRTGLGLVAVTDDAG VLIGVFTDGDLRRWLHKGENIQAGISRVMTVGSKTLNAGQLATEALAMFHEQKISAAPVVDEQGRVTGAINLHDIHDAGI F |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-46 | 42 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 8e-47 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-46 | 42 |
