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Name : clpV1 (EAMY_3005) Accession : YP_003532360.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : type VI secretion system core protein ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3111012 - 3113627 bp Length : 2616 bp Strand : - Note : type VI secretion system, core protein COG542: ATPases with chaperone activity, ATP-binding subunit ATPase family associated with various cellular activities (AAA) DNA sequence : ATGTCAGAAATCAGCCGCGCCGTACTGTTCGGCAAACTGGATACGCTGTTATTTACCTCTCTGGAGAGCGCCACCGCGTT TTGCAAACTGCGCGGCAACCCCTATGTGGAGCTGGTGCACTGGCTGCATCAGCTGATGCAGCAACAGAGCGGTGACTTAC AGCAGCTTATCCGCCATTTTTCACTGGATGAAGAGGCGCTGACGCGGGATATCGTGGCGGCGCTCGACAGGCTGCCGCGC GGAGCCAGCGCGGTCTCTGACCTGTCTGAACATATCGACAGCGCGGTGGAGCGCGCCTGGGTTTACGCTTCGTTGAAGTT CGGCGTACAGCAGATCCGTGGCGGCCACCTGCTTACCGGCCTGCTGAAAACCTTTAACCTTGCCAACCTGCTGAAAGGCA TCTCGCCGCAGTTCAGCCGCGTCAGCGTTGACGTGCTGCTGGAGCAGTTCGATCGGGTATTTGGCGACAGCAAAGAAGCC CGGCAGGTCAGCGCTGCCCCGCAGACGCCCGGTGGCGAGGTGCCGCAGCAGCAGGGCACGCTGGCGCAGTATGCCCAGGA TCTGACGGCGCGCGCGCGCGACGGCAAGATCGACCCGGTGGCCGGACGCGACCAGGAGATCCGCCAGATGGTGGATATTC TGATGCGCCGCCGCCAGAACAACCCGCTACTGACCGGGGAAGCCGGGGTGGGAAAAACGGCGGTGGTGGAAGGGCTGGCG CTGCGTATCGCCGCCGGCGATGTGCCGGAACCGCTGCAACAGGTGCAGCTGTGGCTGCTGGATATCGGCATGCTGCAGGC CGGAGCCGGCATGAAGGGCGAATTTGAGGCGCGGCTACAGGCGCTGATTAACGAAGTGCAGTCCAGCCCGACGCCGATCG TGCTGTTTATTGACGAGATCCACACCCTGGTCGGCGCGGGCGGCCAGCAGGGCACCGGCGATGCCGCCAACCTGCTGAAA CCGGCGCTGGCACGCGGCCAGCTGCGCACCATCGGCGCTACCACCTGGGCGGAATACAAAAAGTACATTGAGAAAGACCC GGCGCTGACGCGCCGCTTCCAGACCGTGCAGGTGCACGAGCCGGACGAAGAAAAAGCGCTGCTGATGCTGCGCAGCACCG TCAGCCCGCTGGAACAGCATCACCGCATCCTGCTGCTGGATGAGGCGGTCGCGGCGGCGGTTAAACTCTCTCATCGCTAT ATTCCGGCGCGTCAGCTGCCGGATAAGGCGGTGGCGCTGCTGGACACCGCCTGTGCGCGCGTCGCCGTCAGCCAGAGCGC CCGGCCGCCGCAGCTGGAAGATTGCCTGCATCGCATTCATGCGCTGGAAATTGAACGCGATATCGCCGGGCGCGAAGCGA AAGTCGGCATCGGCGAGGCCGGGCGCGTCACGCAGCTGGAACAGCAGCTGGCGGAGCTGGCCGCACAGCGCGACCGGCTG AACGCACGCTGGCAGCAGGAGCGCAGCCTGGTGGATAGCCTGATTGCCTTGCGGGCGCAGCTTAGCGCAGAGACGGCGGA AAACCCGGCGAACCTGCATCAGCAGCTGGCCGAACGCCAGCAGCAGCTGCGTGAACTGCAGGGCGACACCCCGCTGCTGT TCGCGGCGGTGGATGCCAACGTGGTGGCGGCGGTGGTCGCCGACTGGACCGGCATTCCGCTGGGACGGATGGTGAAAAAC GAAATCGACGCGGTGCTCAAGCTGGCGGATACCCTGAATCAACGGGTGATTGGTCAGCGCCACGGCCTTGACCTGATTGC CAAACGGGTGCGCACCTCACGCGCCCGCCTTGACGACCCGAACAAGCCGGTCGGGGTCTTTATGCTGTGCGGGCCATCCG GGGTGGGTAAAACCGAAACCGCGCTGGCGCTGGCGGAAACCCTGTACGGCGGCGAACAGAACATCATTACCATCAATATG AGCGAGTTCCAGGAGGCGCATACCGTTTCCACCCTGAAAGGTGCACCGCCGGGCTACGTTGGCTACGGTGAAGGCGGCGT CCTGACCGAAGCGGTGCGCCGCCGCCCTTACAGCGTGGTCCTGCTGGACGAAATTGAAAAAGCGCACCCGGACGTGCATG AAATCTTCTTCCAGGTGTTTGATAAGGGCTGGATGGAGGACGGAGAAGGGCGGCATATCGATTTCCGCAATACCATTATC ATTCTCACTTCTAACGTCGGTACGCAGCTGATTAGCGCCATGTGTGCCGACCCGGAGCTGATGCCGCAGCCAGAGGACCT GGCCGGGGCGCTGCGCCCGGCACTGCTGGAGGTGTTTCCCCCGGCGCTACTGGGCCGCCTGCTGGTGGTGCCTTACTACC CGCTCAGTGATGAGGTGCTGGCCAATATCGTCCGTCTGCAATTACAGCGTATTCAGCGGCGGCTCCAAGAGAATCACGGT ATCATCTCCGACGTGGATGACAGCGTAATTAGCCAGATTGTTCAGCGCTGTACCGAAGTGGAGTCCGGCGGCCGTATGGT CGACGCCATTCTTACCAATACCCTGTTGCCGCAAATGAGCCAGATGCTGCTGTCTGCCAGCGCGCGCGACGAACAATTCC GTCGCCTGCGCGTTACGTTACAGCAGGGCGAATTCCAGTGTCAGTTTGAGGCGTAA Protein sequence : MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQSGDLQQLIRHFSLDEEALTRDIVAALDRLPR GASAVSDLSEHIDSAVERAWVYASLKFGVQQIRGGHLLTGLLKTFNLANLLKGISPQFSRVSVDVLLEQFDRVFGDSKEA RQVSAAPQTPGGEVPQQQGTLAQYAQDLTARARDGKIDPVAGRDQEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLA LRIAAGDVPEPLQQVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSPTPIVLFIDEIHTLVGAGGQQGTGDAANLLK PALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVHEPDEEKALLMLRSTVSPLEQHHRILLLDEAVAAAVKLSHRY IPARQLPDKAVALLDTACARVAVSQSARPPQLEDCLHRIHALEIERDIAGREAKVGIGEAGRVTQLEQQLAELAAQRDRL NARWQQERSLVDSLIALRAQLSAETAENPANLHQQLAERQQQLRELQGDTPLLFAAVDANVVAAVVADWTGIPLGRMVKN EIDAVLKLADTLNQRVIGQRHGLDLIAKRVRTSRARLDDPNKPVGVFMLCGPSGVGKTETALALAETLYGGEQNIITINM SEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWMEDGEGRHIDFRNTII ILTSNVGTQLISAMCADPELMPQPEDLAGALRPALLEVFPPALLGRLLVVPYYPLSDEVLANIVRLQLQRIQRRLQENHG IISDVDDSVISQIVQRCTEVESGGRMVDAILTNTLLPQMSQMLLSASARDEQFRRLRVTLQQGEFQCQFEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV1 | YP_003532360.1 | type VI secretion system core protein ATPase | VFG2076 | Protein | 0.0 | 60 |
| clpV1 | YP_003532360.1 | type VI secretion system core protein ATPase | VFG2084 | Protein | 2e-137 | 44 |
