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Name : outF (EAMY_2868) Accession : YP_003532223.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : type II secretion system protein OutF Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 2962877 - 2964082 bp Length : 1206 bp Strand : + Note : Bacterial type II secretion system protein F domain, Type II secretion system outF/gspF/pulF, GspF: general secretion pathway protein F DNA sequence : ATGCGTTTCCGCTATCAGGCGCTCAATCAGCGTGGCGTCAAAGTTCAGGGCGAAACCGAAGCCGATACGCCACAGCAGGC ACGCCAGCTGCTGCGCGAACAGCAGCTACAGCCATTGCGCTTACAGCCGGTAAAACCGGGCGTACTGCGTTCTGGATCGT CGTCACGCCGTTCGCTGTCTGCCAGCGAGCGGGTATTGATGACGCGCCAGCTGGCAACGCTGGTTGGCGCGGCGTTGCCG TTGGAACAGGCGCTGCTGGCGCTGGAAAAGCAGACTACCAAACCAGCGGGGCGCACCATGCTGCATGCCATCCGCCAGAA GGTGCTGGAAGGTGCTTCACTGGCGGATGCCGTTGGCCTTTATCCTGCCACGTTCCCTCCGCTCTATCAGGCGATGATCG CCGCCGGAGAAGCATCGGGCAAACTGGATAACGTGCTGGAGCAATTAGCTGATTACAGCGAAAAGACGCAGCAGATCAAA GGTAAGCTTACCCAGTCAATGATCTACCCCCTGCTGCTGACGCTGGTGGCCATCAGCGTGATCACCATTTTGCTGACCGC CGTGGTGCCCAGCGTGGTCGAACAGTTCGTACACATGAAACAGGCTTTACCGCTGTCTACCCGCCTGCTGATGAGCATCA GCGAAATAACGCGCGCCATCGGCCTGCCGGTGCTGCTGGTTATTCTGCTGGCGGGTTTCTGCGCCCGCATCATACTGCGC CGCCCGGCACAGCAGTTACGCTGGCACCAGGCCAAGCTGCGGCTGCCGCTCATTGGCCGTATCGTCCTTAATCTCAACCT GGCACGCTATGCGCGCACCCTGAGCATCCTGACCAACAGCGCCGTACCGCTGCTGGAAGGCATGCATATCAGCGCCACCG TATTAACCAATCTGTTTATACGCCAACAGTTACAGCTCGCCGCCGAACGGGTACGCGAAGGCACCACCCTGACGCTGGCG CTCGAACAAACCAGGCTGCTGTCGCCAATGATGGGCCATATGATCGCCAGCGGCGAAAGCAGCGGTGAACTGGACAGCAT GCTGACCAAAGCGGCCGATATTCAGGACAGCGCCTTTCTTAGCCAGATGACGCTGGCAGTCAGCCTGTTTGAACCCCTGC TGGTGGTGGTGATGGCTGGCGTGGTGCTGTTTATCGTGCTGGCCATTCTGCAACCCATTTTACAACTCAACAGCCTGATA GGATAA Protein sequence : MRFRYQALNQRGVKVQGETEADTPQQARQLLREQQLQPLRLQPVKPGVLRSGSSSRRSLSASERVLMTRQLATLVGAALP LEQALLALEKQTTKPAGRTMLHAIRQKVLEGASLADAVGLYPATFPPLYQAMIAAGEASGKLDNVLEQLADYSEKTQQIK GKLTQSMIYPLLLTLVAISVITILLTAVVPSVVEQFVHMKQALPLSTRLLMSISEITRAIGLPVLLVILLAGFCARIILR RPAQQLRWHQAKLRLPLIGRIVLNLNLARYARTLSILTNSAVPLLEGMHISATVLTNLFIRQQLQLAAERVREGTTLTLA LEQTRLLSPMMGHMIASGESSGELDSMLTKAADIQDSAFLSQMTLAVSLFEPLLVVVMAGVVLFIVLAILQPILQLNSLI G |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 6e-71 | 53 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-71 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| outF | YP_003532223.1 | type II secretion system protein OutF | VFG2049 | Protein | 2e-67 | 52 |
| outF | YP_003532223.1 | type II secretion system protein OutF | VFG0181 | Protein | 1e-65 | 49 |
| outF | YP_003532223.1 | type II secretion system protein OutF | VFG1870 | Protein | 7e-61 | 43 |
