Gene Information

Name : outE (EAMY_2867)
Accession : YP_003532222.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : type II secretion system protein OutE
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 2961409 - 2962875 bp
Length : 1467 bp
Strand : +
Note : Type II secretion system outE/gspE/pulE, Type II/IV secretion system proteinGeneral secretion pathway protein E (Type II traffic warden ATPase)

DNA sequence :
ATGAGTCAGCCACTGTTTCCATTCAGCTGGGTACAACAGCATAACGTGCTGCTGGCACCGGATGGCGAATCCGTGGCGCT
GTGCTTCCATTCTGGCAGCAGTATGACTGCCATTCTGGAAGCTCGCCGCCATGCTCCCGAAGCCAGTCTGCAACTGCTTT
CCGAAGACGTTTTCCGTCAGAAGATGAGCGACGCCTATCAGCAAAATACGTCTTCAACGCAGATGTTCGAGACGCTGGGT
AGCGAGTTTGACCTCGACCAGCTGGTAGACGGCCTGCCTGAAGATAATGACCTGCTTGACAGTGACGATGGCGCCCCGGT
TATCCGCCTGATCAATGCCATTCTCAGTGAGGCGATCAAAGAAGGGGCCTCCGATATTCATATTGAGCCATTCGAGAAGA
AGCTAAGCGTGCGCTTCCGCGTTGACGGGATGCTGCGCACCATTCTGTCCCCGCCAGCGCAGCTCAGTCGCTACCTGTTA
TCGCGAATTAAGGTAATGGCAAAGCTTGATATTGCCGAAAAACGCATCCCGCAGGATGGGCGTATCTCTCTGCGCCTGGG
CGGCAGAAATATCGATGTGCGTGTCTCCACTCTGCCTTCGCGGCATGGTGAGCGCATCGTACTGCGCGTGCTGGACAAGA
ACGGGCTGACGCTGAACCTTGCCGATATCGGTATGTCCCCACAGGCGGAGCAAGCGATGAACCGCCTGCTGAAGACGCCG
CATGGCATCCTGTTGGTAACCGGACCTACCGGTTCGGGAAAAAGTACCACCCTGTATGCCGGGCTTAAGCTTATCCATAG
CGACGACAAAAATATCATGACCATTGAAGATCCGGTGGAGTACGAACTGGAAGGAATTGGGCAGACGCAAGTCAACAGCA
AGGTCGATATGACCTTTGCTCGTGGTCTGCGCGCCATTCTGCGCCAGGACCCGGACATCGTGATGATTGGTGAGATCCGC
GATGGCGAAACCGCGCAGATCGCCGTTCAGGCTTCACTCACCGGGCACCTGGTGCTCTCGACGCTGCACACCAACAGCGC
TTTTGGCGCCATTGAGCGTCTGCGCGATATGGGGGTCGAGCCCTTCCTGCTCGCCAACTCGCTGATAGGCGTGCTGGCCC
AGCGCCTGGTACGCAGGCTGTGTCCCGCCTGCCGTCAGCCGGGCGCGGCAACCGCCGTTGAGCTGGCGCATTTTTCTCCC
AGCCCACCGTCTGGCATTCAGCTGTGGCGCGCTGTCGGCTGCGAACAGTGTAATAACAACGGCTATCGCGGGCGCGTCGG
CATCTATGAGTTGCTGACCATTGATGATGCACTCCGCCAGGCGATCGGTCAGAACAAAAGTGAGAATGCACTGAGCCAGC
TGGTCAACGCGGACTATTGTTCTTTGCAACAGGACGGCCTGCAAAAGGTGCTCAGCGGTATGACCACGCTCGAAGAGATC
CTTCGCGTCACGCGCGAGGCACATTGA

Protein sequence :
MSQPLFPFSWVQQHNVLLAPDGESVALCFHSGSSMTAILEARRHAPEASLQLLSEDVFRQKMSDAYQQNTSSTQMFETLG
SEFDLDQLVDGLPEDNDLLDSDDGAPVIRLINAILSEAIKEGASDIHIEPFEKKLSVRFRVDGMLRTILSPPAQLSRYLL
SRIKVMAKLDIAEKRIPQDGRISLRLGGRNIDVRVSTLPSRHGERIVLRVLDKNGLTLNLADIGMSPQAEQAMNRLLKTP
HGILLVTGPTGSGKSTTLYAGLKLIHSDDKNIMTIEDPVEYELEGIGQTQVNSKVDMTFARGLRAILRQDPDIVMIGEIR
DGETAQIAVQASLTGHLVLSTLHTNSAFGAIERLRDMGVEPFLLANSLIGVLAQRLVRRLCPACRQPGAATAVELAHFSP
SPPSGIQLWRAVGCEQCNNNGYRGRVGIYELLTIDDALRQAIGQNKSENALSQLVNADYCSLQQDGLQKVLSGMTTLEEI
LRVTREAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 9e-124 60
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-124 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
outE YP_003532222.1 type II secretion system protein OutE VFG0182 Protein 3e-132 61
outE YP_003532222.1 type II secretion system protein OutE VFG2048 Protein 3e-125 59
outE YP_003532222.1 type II secretion system protein OutE VFG1876 Protein 3e-121 51
outE YP_003532222.1 type II secretion system protein OutE VFG2426 Protein 7e-79 46
outE YP_003532222.1 type II secretion system protein OutE VFG1880 Protein 1e-82 45
outE YP_003532222.1 type II secretion system protein OutE VFG0233 Protein 2e-83 45