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Name : outD (EAMY_2866) Accession : YP_003532221.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : type II secretion system protein OutD Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 2959472 - 2961409 bp Length : 1938 bp Strand : + Note : Type II secretion system outD/gspD/pulD, Bacterial type II and III secretion system protein, type_II_gspD: general secretion pathway protein D DNA sequence : ATGAAGAAGAGATCCCCCCAATCCGCTACCAGCATCCGGCGGCTGTTACCGCTGCTGCTGATTTGCACGTTATTTTCTGC GCCTGTGCAGGCGGATGGCTATCAGGCGAGCTTCAAAAATACCGAGATCGAAGAATTTATTAACACCGTGAGTAAGTCAC TGAATAAAACCATCATTATCGATCCTGCGGTGAAAGGAAAAATCAGCGTGCGCAGCTATGAAACGCTGGATGCGCAACAG TATTATCAGTTTTTCCTCAGTGTGCTTGAGGTTTACGGCTACACCGCGATCAGCATGGATAATGGCGTCCTTAAAATTAT TCCGTCTAAAAATACCAAAGGTGCCGCCGTACCCTTTGTTACCGCTGGCAGCAATGCCGTCGGCGATGAAGTGATTACCC GGGTAGTACCACTGCAGTTCGTCACGGCAAAAGACCTGGCGCCCTTACTGCGCCAGCTTAACGATGCTGCTGCGGGCAGC GTGGTGCATTACGACCCGAGTAACGTGTTATTAATGACCGGCCGGGCAGCGGTGATCAGCCAGCTGATGGCCATTGTCGG CAGTATCGACCTGCCTGAAGACACCACGGTCGATACGGTCAAATTGCAGTGGGCATCGGCCCCACAGGTTGCGGAAATAC TCAATTTTATCAACGGTGATAGCAAAACAGCGGGCAGCAATAAACCGTTCGCCAAAGCCGTCGCGGATACGCGCACCAAT GCCGTACTGATTACCGGCGACGAGCTGGCACGTCAACAGCTGGTTGATGCAGCAAGAAATCTGGATGAAGAGAAAGACCG CAGCAGCAACTCCAGGGTGTTTTATCTGAAGCACGCTAAAGCCGAAAACCTGGTAGAGGTACTGAGCGGCGTAAGCAGTA ACATACAGGACAAATCTGAGTCTAAATCCGCCAGCCCGGTTGCGATGTCAAAAGACATCGTTGTGAAGGCCGACACCTAT ACCAACTCACTGATTATCAACGCGCCGCCGGATGTGATGGGCGATCTCGAAGAAATTATTAACCGACTCGATATCAGCCG TGCTCAGGTGCAGGTAGAAGCGATCATCGTTGAGGTACAGGATGCGGACGGCCTGGCGCTGGGAGTACAGTGGTTCAACA AAAACGGCGGCGGAACGCAGTTCCCGGCAAGCGATGCTCCGGTCAGTAATCTGATTGGCAGTACCATTGCCGAAGCGCTG AGTAAAACCAACGGTCTGGCCGCCGGATTCTACCACGGTAACTGGGCAGGATTATTCACCGCGCTGCAAACCAACAGCCA GAATAATATTCTGGCAACGCCAAGTATTGTGACGCTGGATAACATGGAGGCCGAATTTACCGTGGGCCAGGATGTGCCCA TTCTTACCGGCACGCAAACCACCAACACCGACGGCGTGTACAACTCGGTCGACCGCAAAAGCGTCGGTATCAAACTGAAA GTGAAGCCGCAAATCAATAAAGGCGACTCGGTGCTGATGGAGATTGAGCAGGAAGTGTCGAGCGTAGCCGAACAGAGCTC GGTCGATCCGCTGGGAGCGACCTTTAATACCCGCCTGGTGAAGAATGCGGTACTGGTTGAAAGCGGCAAGACCGTGGTAG TCGGTGGGCTTCTCGACACCACGCATAGCAACGTGGAGAGCAGCGTCCCGGTACTCGGCCAGATCCCGTTGATTGGCAGA CTGTTCCGCTATACCTCTGATAAAAAGAGTAAACGCAACCTGATGCTGTTTATCCGTCCAACCATCATTCGTCAGCAGGA TAAATTTGACCTCACCAGCGGCAGCAAGCTGGAGAAATTCCGCGAGAAGCTCGGCAACGGCGAAGGCGACAAACGCGTTG CTCAAGCCATCGATGAAAATCTGTTAATAAAGCAGGGTAACCAGGCGCTGGTGGAAATACAGAAGCACATCGCTGATTTC TACCGGAAAAAAGCGTAA Protein sequence : MKKRSPQSATSIRRLLPLLLICTLFSAPVQADGYQASFKNTEIEEFINTVSKSLNKTIIIDPAVKGKISVRSYETLDAQQ YYQFFLSVLEVYGYTAISMDNGVLKIIPSKNTKGAAVPFVTAGSNAVGDEVITRVVPLQFVTAKDLAPLLRQLNDAAAGS VVHYDPSNVLLMTGRAAVISQLMAIVGSIDLPEDTTVDTVKLQWASAPQVAEILNFINGDSKTAGSNKPFAKAVADTRTN AVLITGDELARQQLVDAARNLDEEKDRSSNSRVFYLKHAKAENLVEVLSGVSSNIQDKSESKSASPVAMSKDIVVKADTY TNSLIINAPPDVMGDLEEIINRLDISRAQVQVEAIIVEVQDADGLALGVQWFNKNGGGTQFPASDAPVSNLIGSTIAEAL SKTNGLAAGFYHGNWAGLFTALQTNSQNNILATPSIVTLDNMEAEFTVGQDVPILTGTQTTNTDGVYNSVDRKSVGIKLK VKPQINKGDSVLMEIEQEVSSVAEQSSVDPLGATFNTRLVKNAVLVESGKTVVVGGLLDTTHSNVESSVPVLGQIPLIGR LFRYTSDKKSKRNLMLFIRPTIIRQQDKFDLTSGSKLEKFREKLGNGEGDKRVAQAIDENLLIKQGNQALVEIQKHIADF YRKKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-101 | 43 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 3e-107 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| outD | YP_003532221.1 | type II secretion system protein OutD | VFG2047 | Protein | 1e-98 | 43 |
