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Name : hofB (EAMY_2857) Accession : YP_003532212.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : General secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2951506 - 2952906 bp Length : 1401 bp Strand : + Note : General secretion pathway protein E (Type II traffic warden ATPase) (Pectic enzymes secretion protein outE), Bacterial type II secretion system protein E, Type II/IV secretion system protein, type_II_gspE: general secretory pathway protein E DNA sequence : ATGACACCGGCAACACAACGAGCGGTCGAAGCGATTTGTCAGGCTCATCAGGCAATAATAGTTGAGTTCAACGCACAGCG GCTACATATCGCGGTAGCTGAGACACCCAGCCATACGCTGATGGCCGAACTGCGTTTTGCCGCCCACTGTCCTATTGAAG TTGAATGCTGGCCGAAAGCAAGACTGGAGCAATCCCACCAACGGGAGAAACTTCCGGATCTGGCTGCGGCAGAGGATGGG CCGGAGCATACCGGGACGGCAGTAGAGATCATCAACGCCTTACTGGTGCAAGCGTTACAAAAACGTGCATCTGATATTCA CATTGAGCCGCAGGAAGGTAGCCTGCGGCTGCGCTTACGTGTCGACGGCGTATTACAGCACTTGCCCCTGGCCGGGGTGG ACAACAGCGCGCCGCTGATCGCTCGCCTGAAAATTCTTGCCAGTTTGGATATCTCCGAACGTCGGGTGCCACAGGATGGA CAGTTTTCATTGTTGCTGAAAGGTCATAACGAGTCGTTCCGTCTCTCGACCCTGCCAACGCGATTTGGTGAAAAAGCCGT GGTACGTCTGTTGCAAAGCGATAGCCATGCCATTGCGCTGGAAAACCTGGGTATGCCCGGCTCGCTGTTGAAGCGCTACC GCGAAGCGCTGGCTCGTCCGCAAGGGATGATCCTGGTCACCGGCCCCACCGGCAGTGGCAAAACCTTCACGCTCTATAGT GGACTAAGCTGGTTGAATATCGCCACGCGTAATCTGTGCAGCGTGGAGGATCCGGTGGAAATCCCCATGGTGGGTGTCAA TCAAACTCAGATCCACGCTAAGTCAGGGCTGGATTTTCAACGTGTGTTACGTGCGCTGCTGCGCCAGGATCCCGACGTGA TTATGATCGGCGAGATCCGAGATGGTGAAACCGCCGAGATCGCCATAAAAGCCGCGCAGACAGGGCATTTGGTGCTTTCA ACGTTGCATACTAATTCAACTACCGAAACGCTGGTGCGGCTGGGTCAGATGGGCGTGCCTGGATATTTGCTGGCTTCGGC TCTTAAACTTGTGATCGCGCAGCGGCTGGTAAGAAAGCTCTGTCCTCACTGCCGTCAACCTGCTACGGCAGTTTCCCATT TTCCTCCCCATATCTGGCCAGGAACCGTGCAAAACTGGCTGGCGGTGGGCTGTGAACGTTGTTTCTCGGGTTTCTATGGC CGTCTTGCTCTGTTTGAGCTGCTGCCCATCTCCGCACGACTGCAAAACGCACTGGCAAAATCGGCCCAACCGGAGGAACT GGCTAAGATTGCACGGCAGCAGGGAATGAACACGCTGTTCGTTGAAGGACTGCATTGCGTCAATCGCGGAGAAACAACGC TGGAGGAGCTCACCCGTGTAGCCGGGGGCAGCGATGGGTGA Protein sequence : MTPATQRAVEAICQAHQAIIVEFNAQRLHIAVAETPSHTLMAELRFAAHCPIEVECWPKARLEQSHQREKLPDLAAAEDG PEHTGTAVEIINALLVQALQKRASDIHIEPQEGSLRLRLRVDGVLQHLPLAGVDNSAPLIARLKILASLDISERRVPQDG QFSLLLKGHNESFRLSTLPTRFGEKAVVRLLQSDSHAIALENLGMPGSLLKRYREALARPQGMILVTGPTGSGKTFTLYS GLSWLNIATRNLCSVEDPVEIPMVGVNQTQIHAKSGLDFQRVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLS TLHTNSTTETLVRLGQMGVPGYLLASALKLVIAQRLVRKLCPHCRQPATAVSHFPPHIWPGTVQNWLAVGCERCFSGFYG RLALFELLPISARLQNALAKSAQPEELAKIARQQGMNTLFVEGLHCVNRGETTLEELTRVAGGSDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-74 | 46 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-73 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hofB | YP_003532212.1 | General secretion pathway protein E | VFG0112 | Protein | 3e-80 | 47 |
| hofB | YP_003532212.1 | General secretion pathway protein E | VFG2426 | Protein | 2e-75 | 46 |
| hofB | YP_003532212.1 | General secretion pathway protein E | VFG2048 | Protein | 2e-75 | 46 |
| hofB | YP_003532212.1 | General secretion pathway protein E | VFG1876 | Protein | 7e-72 | 44 |
| hofB | YP_003532212.1 | General secretion pathway protein E | VFG0182 | Protein | 7e-68 | 44 |
| hofB | YP_003532212.1 | General secretion pathway protein E | VFG0233 | Protein | 4e-70 | 44 |
