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Name : cadA (EAMY_2742) Accession : YP_003532097.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : - Position : 2825820 - 2827994 bp Length : 2175 bp Strand : - Note : Lysine decarboxylase (LDC), Ornithine/lysine/arginine decarboxylase DNA sequence : ATGAATATTATTGCCATCATGGGCCCGCATCGCGTCTTCTACAAAGATGAGCCTGTCCGTGAGCTGGATGTCGCATTAAC ACGACAGGGGTTCCACACCGTCTATCCGCAGGGTGCCGGAGATTTGCTGAAGCTTGTAGAGCATAATCCGCGAATTTGTG GCGTGGTATTTGACTGGGATGAGTACAGTCTCGATCTCTGTCGTGAGATCAACCAGCTGAATGAATATCTGCCGCTTTAC GCGTTTATCAACACCGATTCGACGATGGATGTTGGCGTTAACGAGATGCGCATGGCGATCTGGTTTTTTGAGTATGCGCT TAATGCAGGTGAAGAGATTGCCCAGCGTATCCGCCAATATACCGATGAATACATCGATACCATCACGCCGCCGCTGACCA AAGCGCTGTTCAACTACGTCAAAGAGGGAAAAACAACGTTTTGTACTCCGGGGCATATGGCGGGTACGGCATTTCAGAAA AGCCCGGTGGGCAGCCTGTTCTATGACTTCTTTGGTGCCAATACGCTGAAAGCGGATATTTCGATTTCGGTCAGTGAATT AGGTTCGTTGCTCGACCACACCGGCCCCCATCTTGAGGCGGAAGAGTATATCGCGCGCACCTTTGGCGCGGAGCAAAGCT ACATGGTCACCAATGGCACCTCCACCGCCAACAAGATTGTCGGCATGTACGCGGCGGCGGCAGGCAGTACCGTGTTGATA GACCGCAACTGCCATAAATCCCTGACCCATCTGCTGATGATGAGCGACATTATTCCCGTCTGGCTGAAGCCAACGCGCAA TGCGCTGGGGATCCTTGGCGGCATTCCGAAGCGAGAATTTAGCAAAGAGAGCATTGCGCTCAAGGTGGCACAAACACCGC GCGCCAGCTGGCCGGTACATGCGGCGATCACTAATTCGACCTATGACGGGCTGTTGTATAACACGCAATACATCAAAGAA ACGCTGGAGGTGCCGTCGATCCACTTCGACTCGGCGTGGGTGCCTTACACGAATTTCCACCCGATCTATCAGGGATTGAG CGGCATGAGCGGGGAACGCACGCCGGGTAAGGTGATTTACGAGACGCAGTCGACTCACAAATTGCTGGCCGCGTTCTCTC AGGCTTCGCTGATCCACATCAAAGGTGACTACGATGAACAAACCTTCAATGAAGCCTATATGATGCATACCACCACTTCG CCTAACTACGCCATCGTCGCCTCTATCGAAACGGCGGCGGCGATGCTGCGCGGTAACTCTGGCAAACGACTGATTAACCG TTCGGTAGAGCGCGCGCTGCATTTCCGCCGTGAAGTACAGCGGCTGCGTGAAGAGTCAGACGGCTGGTTCTTCGATATCT GGCAGCCGGACGGGGTTGATGAGCCGGAATGTTGGGCGATCCAGCCCGGTGATGAGCAGTGGCATGGTTTCCGTGATGCC GATGCCGATCATATGTATCTGGATCCGATCAAAGTGACCATCCTGACGCCCGGCATGAGCGAGATGGGTGAGATGGCGGA AGAGGGCATTCCGGCAGCGTTGGTAGCCAAATTCCTTGACGAACGTGGCGTGGTGGTGGAAAAGACCGGGCCGTATAATC TGCTGTTTTTGTTCAGTATTGGCATCGATAAAACCAAAGCAATGAGCGTACTGCGCGGACTGACCGAGTTTAAACGCGCT TACGATCTCAATCTGCGGGTAAAAAACATGCTGCCGGATCTGTACGCACAGGATCCTGACTTATATCGTAATATGCGCAT TCAGACTCTGGCTCACGGCATCCACAACCTGATCCGCCAACACGATCTGCCACGCCTGATGCTACAAGCTTTCGCCACGC TGCCGGAAATGAAGTTGACGCCGCATCAGATGTTTCAGCAGCAGGTAAAGGGCAACGTGGAAACCGTCGATATCAGCCAG CTGGTCGGGCGCGTGTCGGCCAACATGATCTTGCCTTATCCCCCCGGCGTGCCGCTGGTGATGCCGGGGGAAATGATCAC TGAAGAAAGTCGCCCGGTGCTCGATTTCTTACTGATGCTGTGTACCATCGGCAGACATTATCCCGGCTTTGAAACCGATA TTCACGGTGCGAAACTGACCGAAGAGGGGCAGTATCTGGTGCGGGTGCTGACTCACGATGGCGAAGTGCGGGCTGCCGGA AATGCGGGGGTTTAA Protein sequence : MNIIAIMGPHRVFYKDEPVRELDVALTRQGFHTVYPQGAGDLLKLVEHNPRICGVVFDWDEYSLDLCREINQLNEYLPLY AFINTDSTMDVGVNEMRMAIWFFEYALNAGEEIAQRIRQYTDEYIDTITPPLTKALFNYVKEGKTTFCTPGHMAGTAFQK SPVGSLFYDFFGANTLKADISISVSELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTANKIVGMYAAAAGSTVLI DRNCHKSLTHLLMMSDIIPVWLKPTRNALGILGGIPKREFSKESIALKVAQTPRASWPVHAAITNSTYDGLLYNTQYIKE TLEVPSIHFDSAWVPYTNFHPIYQGLSGMSGERTPGKVIYETQSTHKLLAAFSQASLIHIKGDYDEQTFNEAYMMHTTTS PNYAIVASIETAAAMLRGNSGKRLINRSVERALHFRREVQRLREESDGWFFDIWQPDGVDEPECWAIQPGDEQWHGFRDA DADHMYLDPIKVTILTPGMSEMGEMAEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTKAMSVLRGLTEFKRA YDLNLRVKNMLPDLYAQDPDLYRNMRIQTLAHGIHNLIRQHDLPRLMLQAFATLPEMKLTPHQMFQQQVKGNVETVDISQ LVGRVSANMILPYPPGVPLVMPGEMITEESRPVLDFLLMLCTIGRHYPGFETDIHGAKLTEEGQYLVRVLTHDGEVRAAG NAGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 71 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadA | YP_003532097.1 | lysine decarboxylase | VFG1670 | Protein | 0.0 | 62 |
