|
Name : thiC (EAMY_0252) Accession : YP_003529610.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 300538 - 302472 bp Length : 1935 bp Strand : - Note : - DNA sequence : ATGTCTATCGTTGAAAAAAAACCCACCCGCCGCGAACAGCGCGCCCAGGCGCAGCAGTTTATTGAGTCGTTGCAGGGCAG TGCCTTTCCCAACTCAAAGCGCATCTGGTTGACCGGATCGCAGCCCGATATTCGCGTGCCGATGCGTGAGATCCAGCTTA GCCCCACCGTAACAGGCGGCAGCAAAGATAACCCAACGCTTGTCGGCAATGAACCGGTGCCGGTCTATGATACTGCCGGT CCCTATGGCGACCCGGAGGCGAGCATTGATGTTTATGCCGGGCTGGCCAAACTGCGTGCTGACTGGATCGTTAAACGCGA TGACACAGAACAGATCGCCGAACTGAGTTCCGCCTATACCCAGCAACGCCTGGCCGATGAAGGACTGGATCATCTGCGTT TCGACAATTTGCCCTGTCCTCGCCGCGCCCGTGCCGGCCGCTGTGTGACCCAGATGCACTACGCGCGTCTTGGGGTGATC ACCCCGGAAATGGAATTTATTGCCATCCGTGAAAATATGGGGCGCGAGCGTATTCGCGCTGAGGTGCTGTTACAACAGCA TCCGGGTAACAGCTTTGGTGCCAGCCTGCCGGAAAATATTACCCCTGAATTTGTCCGTCAGGAAGTTGCCGCCGGGCGCG CCATTATTCCCGCCAATATTAACCACCCGGAATCCGAACCGATGATTATTGGCCGTCATTTCCTGGTGAAAATCAACGCC AATATCGGCAACTCGGCGGTCAGCTCCTCTATCGAAGAAGAGGTGGAAAAGCTGGTGTGGTCAGCGCGCTGGGGCGCAGA TACGGTGATGGACCTGTCCACCGGGCGTTATATCCATGAAACCCGCGAGTGGATCCTGCGCAACAGCCCGGTTCCCATTG GTACTGTGCCGATCTATCAGGCGCTGGAAAAAGTGAACGGCGTGGCGGAAGACCTCAACTGGGAAATCTTCCGCGATACC CTGCTGGAACAGGCTGAACAGGGCGTTGACTACTTCACCATCCATGCCGGCGTACTGCTGCGCTATGTGCCGATGACCGC CAAACGTCTGACCGGCATTGTTTCGCGCGGCGGCTCGATTATGGCGAAATGGTGCCTGTCACATCATCAGGAGAGTTTTC TCTATCTGCACTTTCGCGAAATCTGCGAAATCTGCGCCGCTTATGACGTTTCGCTGTCGCTCGGCGATGGCCTGCGCCCC GGCTCGATTCAGGACGCCAATGATGAGGCCCAGTTCGCCGAGCTGCGCACGCTGGGTGAACTGACTAAAATCGCCTGGGA ATACGACGTGCAGGTGATGATTGAAGGGCCTGGCCATGTGCCAATGCAGATGATCCGCACTAATATGACGCAACAGCTGG AACACTGCCACGAAGCGCCATTCTACACGCTTGGCCCGCTGACCACCGATATCGCTCCGGGATACGACCATTTCACCTCC GGGATTGGCGCCGCAATGATTGGCTGGTTTGGCTGCGCCATGCTGTGCTACGTCACACCCAAAGAGCATCTTGGCTTGCC GAACAAGGAGGATGTCAAACAGGGACTGATTACCTATAAAATTGCGGCCCATGCCGCCGACCTGGCCAAAGGCCATCCCG GCGCACAGATCCGCGACAACGCCATGTCAAAAGCACGCTTCGAATTCCGTTGGGAAGATCAGTTTAATCTCGCCCTCGAT CCGCATACCGCCCGCGCCTACCACGATGAAACTCTGCCGCAGGAATCGGGCAAGGTGGCGCACTTTTGTTCGATGTGCGG ACCGAAGTTCTGTTCCATGAAAATCACTCAGGAAGTGCGGGAATACGCCGCACGACAGGAAGCGGAGGCAAAGCCTGTCG AGATGGGTATGGCACAGATGTCACGGGAATTCCGCAGCCGGGGAGGCGAGCTTTATCACCGCGCCGATAGCCCGACGCCG GAGGAAAAAGTATGA Protein sequence : MSIVEKKPTRREQRAQAQQFIESLQGSAFPNSKRIWLTGSQPDIRVPMREIQLSPTVTGGSKDNPTLVGNEPVPVYDTAG PYGDPEASIDVYAGLAKLRADWIVKRDDTEQIAELSSAYTQQRLADEGLDHLRFDNLPCPRRARAGRCVTQMHYARLGVI TPEMEFIAIRENMGRERIRAEVLLQQHPGNSFGASLPENITPEFVRQEVAAGRAIIPANINHPESEPMIIGRHFLVKINA NIGNSAVSSSIEEEVEKLVWSARWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGVAEDLNWEIFRDT LLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQESFLYLHFREICEICAAYDVSLSLGDGLRP GSIQDANDEAQFAELRTLGELTKIAWEYDVQVMIEGPGHVPMQMIRTNMTQQLEHCHEAPFYTLGPLTTDIAPGYDHFTS GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALD PHTARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVREYAARQEAEAKPVEMGMAQMSREFRSRGGELYHRADSPTP EEKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 72 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 72 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 70 |
