Gene Information

Name : sitC (EAMY_2162)
Accession : YP_003531520.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : iron ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2202444 - 2203301 bp
Length : 858 bp
Strand : +
Note : ABC transport system, inner membrane component, 3.A.1.15.7 SitC (Salmonella iron transporter: fur regulated)

DNA sequence : 
ATGGCGTGGCTTACTGAACCTTTCCACTATCAATATATGCTCAATGCGATGTGGGTTTCAGCGCTGGTGGGCGGCGTTTG
CGCCTTTCTGTCCTGCTACCTGATGCTAAAGGGCTGGTCATTGATTGGTGACGCGCTGTCGCACTCGATCGTTCCGGGGG
TGGCTGGCGCCTATATGTTGGGGCTGCCTTTCGCCCTCGGGGCTTTTCTCTCCGGTGGCCTGGCAGCGGGCAGTATGCTG
TTTCTGAACCAGCGTACACGTTTGAAGGAAGATGCGATTATCGGGCTGATTTTCTCTTCCTTCTTTGGCATCGGGCTATT
TATGGTTTCCCTTAATCCCACTGCGGTAAATATTCAGACTATTGTCCTCGGCAATATTCTGGCCATTGCCCCAGAGGATA
TTCTGCAGCTCGCCATTATTGGCTTCACTTCGCTGCTGATATTATTGATTAAGTGGAAAGATTTGATGGTCACTTTCTTT
GATGAGAATCATGCCCGCTCGGTGGGCCTTAACCCGACGCGTCTCAAGCTGCTGTTTTTCACCCTGCTGGCGACCTGCAC
CATCGCCGCCCTGCAAACCGTCGGCGCTTTTTTGGTGATCTGTCTGGTGGTGACCCCCGGTGCTACCGCCTATCTTCTTA
CCGACCGATTCCCATTGCTGCTGCTGATTGCGGTCGCTATCGGCAGCGTCACCAGCTTCTTCGGCGCGTGGACAAGCTAC
TACCTTGATGGCGCGACTGGCGGCATCATTGTCGTGGCACAGACGCTGGTATTTCTCAGTGCTTTTGTGCTGGCACCAAA
ACACGGCCTGCTGGCACGGCGCAGACGCGTGGCGCAGTCTTCCCGGGAGGCGGTATGA

Protein sequence : 
MAWLTEPFHYQYMLNAMWVSALVGGVCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFALGAFLSGGLAAGSML
FLNQRTRLKEDAIIGLIFSSFFGIGLFMVSLNPTAVNIQTIVLGNILAIAPEDILQLAIIGFTSLLILLIKWKDLMVTFF
DENHARSVGLNPTRLKLLFFTLLATCTIAALQTVGAFLVICLVVTPGATAYLLTDRFPLLLLIAVAIGSVTSFFGAWTSY
YLDGATGGIIVVAQTLVFLSAFVLAPKHGLLARRRRVAQSSREAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-83 85
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-83 85
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-83 85
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-83 85
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 8e-84 85

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitC YP_003531520.1 iron ABC transporter BAC0351 Protein 5e-84 85
sitC YP_003531520.1 iron ABC transporter BAC0441 Protein 2e-68 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitC YP_003531520.1 iron ABC transporter VFG0527 Protein 5e-84 85