Gene Information

Name : sitB (EAMY_2161)
Accession : YP_003531519.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2201641 - 2202444 bp
Length : 804 bp
Strand : +
Note : ABC transporter, ATP-binding protein, TC 3.A.1.15.7 SitB (Salmonella iron transporter: fur regulated)

DNA sequence : 
ATGAACAATAGCGCCACACGCCAGAACGGCATTGAGGTTGATAATCTGACGGTAACCTATCGCAACGGGCACACGGCCTT
GCGTGCCGCCTCATTACAGATCCCCACCGCCAGCATTGCCGCTCTGCTGGGGATCAACGGTTCCGGAAAATCGACGCTGT
TTAAGGCCATTATGGGCTTTGTACCCCCTTCGTCAGGGACGATTACCCTGCTGGATCAACCGTGGCACAAGGCGCTAAAA
CACAATCTTGTGTCGTATGTACCGCAGTCCGAGGATGTCGACTGGTCGTTTCCGGTACTGGTCGAGGACGTGGTGATGAT
GGGCCGTTACGGCCATATGGGCATGCTGCGCATTGCCCGCGCCGAAGATAAACGTCTGGTCGCAGCGGCCCTGGAGCGAG
TTGGCATGACCGATTTCCGCCGTCGTCAGATTGGTGAACTGTCCGGCGGGCAGAAAAAACGTGTCTTTCTCGCCCGCGCT
ATCGCACAGCGTGGTCAGGTGATCCTGCTGGATGAGCCCTTTACCGGCGTCGACGTCAATACCGAGCGTCAGATCGTCAA
CCTGCTACAAGAACTGCGCAACGAGGGGCGCACCATGCTGGTCTCTACCCACAACCTGGCTTCCGTCAGCGACTATTGTG
ACCACACGGTTATTGTCAACGGCACAGTGCTGGCCTGTGGGCCCACTGCCACCACCTTTACCCGTAGCAACCTGGAGAAT
GCCTTTAGCGGTGCGTTGCGCGATCTGGTGTTCAACGACGCCAGCGCTCTGCCGGCGCTCTCCCTCGTTAAGGGCAACCA
CTGA

Protein sequence : 
MNNSATRQNGIEVDNLTVTYRNGHTALRAASLQIPTASIAALLGINGSGKSTLFKAIMGFVPPSSGTITLLDQPWHKALK
HNLVSYVPQSEDVDWSFPVLVEDVVMMGRYGHMGMLRIARAEDKRLVAAALERVGMTDFRRRQIGELSGGQKKRVFLARA
IAQRGQVILLDEPFTGVDVNTERQIVNLLQELRNEGRTMLVSTHNLASVSDYCDHTVIVNGTVLACGPTATTFTRSNLEN
AFSGALRDLVFNDASALPALSLVKGNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-84 71
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-84 71
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-85 71
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-83 70
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-83 70

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_003531519.1 iron ABC transporter ATP-binding protein BAC0350 Protein 5e-85 71
sitB YP_003531519.1 iron ABC transporter ATP-binding protein BAC0440 Protein 1e-75 60
sitB YP_003531519.1 iron ABC transporter ATP-binding protein BAC0400 Protein 1e-48 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_003531519.1 iron ABC transporter ATP-binding protein VFG0526 Protein 5e-85 71