Gene Information

Name : aldB (EAMY_2114)
Accession : YP_003531472.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2159875 - 2161395 bp
Length : 1521 bp
Strand : -
Note : Aldehyde dehydrogenase family

DNA sequence :
ATGCGCTATGCCCGTCCAGGCAGTAACGATTCACTGATTATCCTCAAGCCAAAATATGGCAATTACATCAACGGGGAATT
TGTTGCACCGGTTAACGGGGCCTATTTTACCAACATCTCGCCGGTAAATGGTTCGGCAATCGGTGAGTTCCCGCGTTCGG
ACAAAGATGATGTTGAGAAAGCGCTGGATGCCGCCCACGCTGCTGCCGACGCCTGGGGCAAAACCCCGGTGCAGGCGCGC
TCGCTGGCGCTGCTGAAAATTGCCGACCGCATGGAACAAAATCTGCAACGGCTGGCGGTGAATGAAAGTTGGGACAATGG
CAAGCCGGTGCGTGAAACCCTCGCCGCTGATTTGCCGCTTGCCGTAGATCATTTCCGTTATTTCGCCGGCTGCTTGCGCG
CTCAGGAAGGCGCGGCTGCAGAGATCGATGAGTTCACCGCTGCCTACCACTTCCACGAGCCGCTGGGCGTGGTGGCGCAA
ATTATACCGTGGAACTTCCCGTTGCTGATGGCGGCATGGAAACTGGCACCGGCGCTGGCGGCCGGGAACTGCGTGGTGCT
GAAACCGGCTGAACAGACGCCGCTGTCGATTACGCTGTTTGCTGAACTTGTCGCCGACCTGTTGCCAAAAGGCGTGCTGA
ACGTCATCCACGGTTTCGGGCGCGAAGCGGGAGAAGCGCTGGCTGCCAGCCCGCGTATCGCTAAAGTTGCCTTTACCGGC
TCAACCACCACCGGCGGGCATGTTCTTGAACTGGCTGCAAAAAACCTGATCCCGTCTACCGTTGAGCTGGGGGGTAAATC
ACCGAACATCTTCTTCGCCGACGTTATGCAGGCCGAGCCATCCTTTATCGAAAAGGCAGCGGAGGGCGTTGTGCTGGGCT
TCCTTAATCAGGGGGAAGTCTGTACCTGTCCCTCGCGCGCGCTGGTACAGGAGTCGATCTATCAGCCTTTTATGGCGGCG
GTGCTGGAACGCATAAAAACCATCAAGCGCGGCGATCCGTTGGATACCGATACCATGGTCGGGGCGCAGGCTTCGCAGCA
GCAGTTTGACAAAATCCTTGCCTATCTGGAGATCGCCCGACATGAGGGCGCGCAGGTGCTGACGGGGGGCGAAGTCGAAA
AACTGTCGGGGGATTTATCCGCCGGTTATTACATCCAGCCTACCTTACTGAAGGGCAACAACCGCATGCGCGTGTTTCAG
GAGGAGATATTCGGGCCGGTAGTGGGGGTAACCACCTTTAAAGATGAAGCGGAAGCAATTGCGCTGGCTAACGACTCGAT
CTATGGCCTGGGAGCGGGCGTCTGGACGCGCGATATCAACCGGGCGTACCGCGTCGGGCGGGCAATAAAAGCCGGGCGCG
TCTGGATAAACTGTTACCACCTTTATCCGGCACATGCGGCGTTTGGTGGCTATAAAAAATCCGGCATCGGGCGTGAAACC
CATAAAATGATGCTCGGTCACTATCAGCAGACCAAAAATCTGCTGGTCAGCTACAGCGTACAGCCGCTTGGTTTCTTCTG
A

Protein sequence :
MRYARPGSNDSLIILKPKYGNYINGEFVAPVNGAYFTNISPVNGSAIGEFPRSDKDDVEKALDAAHAAADAWGKTPVQAR
SLALLKIADRMEQNLQRLAVNESWDNGKPVRETLAADLPLAVDHFRYFAGCLRAQEGAAAEIDEFTAAYHFHEPLGVVAQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSITLFAELVADLLPKGVLNVIHGFGREAGEALAASPRIAKVAFTG
STTTGGHVLELAAKNLIPSTVELGGKSPNIFFADVMQAEPSFIEKAAEGVVLGFLNQGEVCTCPSRALVQESIYQPFMAA
VLERIKTIKRGDPLDTDTMVGAQASQQQFDKILAYLEIARHEGAQVLTGGEVEKLSGDLSAGYYIQPTLLKGNNRMRVFQ
EEIFGPVVGVTTFKDEAEAIALANDSIYGLGAGVWTRDINRAYRVGRAIKAGRVWINCYHLYPAHAAFGGYKKSGIGRET
HKMMLGHYQQTKNLLVSYSVQPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-144 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-149 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-149 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-149 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-149 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_003531472.1 aldehyde dehydrogenase VFG0082 Protein 2e-144 64