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Name : topB1 (EAMY_1960) Accession : YP_003531318.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 2021992 - 2022999 bp Length : 1008 bp Strand : - Note : DNA topoisomerase 3 DNA sequence : ATGAAATATCTGGTCACCGGCGCAGCGGGCTTCATTGGCTTCCATGTGGCGCAACGCCTGCTTAACGCCGGTCACCAGGT TGTCGGCCTTGACAACCTGAATGACTATTACGATGTGAATCTCAAAACGGCCCGCCTGGCGCTTATTTCTCATCACGCCA GTTTTACCTTTATTAAGGGCGATCTTGCCGACCGGGAAGGTATGGCAGAATTATTTCGCTGCCATCGCTTTCAGCGGGTA ATCCATCTTGCCGCACAGGCAGGAGTGCGTTATTCACTGGAAAACCCTCTGGCATATGCAGATGCCAATCTGGTGGGTCA TCTTAATATTCTGGAAGGGTGCCGCCATAATCAGGTGGAACACCTGTTATACGCCTCTTCAAGCTCGGTATACGGGCTTA ACCGCAAAATGCCATTTTCTACCGATGATTCAGTCGATCACCCGGTTTCCCTGTATGCTGCTACCAAAAAAGCCAATGAG CTGATGTCCCATACCTATTCTCATCTGTATGGCATCCCGACTAGCGGACTGCGCTTCTTCACCGTTTACGGTCCGTGGGG ACGTCCGGATATGGCATTATTTAAATTTACCCGCGCAATAATTGCCGGCGAAAAAATCGACGTTTATAACCATGGCCAGA TGCGGCGCGATTTCACCTATATCGACGACATTGTTGAATCTGTTTTCCGCCTGCAGGAGGTGATCCCGCAGGCGGACAAA GACTGGACGGTAGAAGCAGGTAGCCCTGCTACCAGTTCGGCCCCTTACCGGGTTTACAATATTGGCAACAGCCAGCCCGT CACCTTGATGGACTATATTGGGGCGCTGGAGAGCGCACTGGGCACGGTAGCGGATAAGAACATGTTGCAGATGCAGCCTG GTGACGTCGTCGACACCAGCGCGGATATCAGTGCCTTGTATAAGGCCATTGGTTTCAAACCGCAAACTTCAGTGAAAGAG GGGGTTGCGCGCTTTGTGTCCTGGTATAAAGAGTTTTATCACAAGTAA Protein sequence : MKYLVTGAAGFIGFHVAQRLLNAGHQVVGLDNLNDYYDVNLKTARLALISHHASFTFIKGDLADREGMAELFRCHRFQRV IHLAAQAGVRYSLENPLAYADANLVGHLNILEGCRHNQVEHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANE LMSHTYSHLYGIPTSGLRFFTVYGPWGRPDMALFKFTRAIIAGEKIDVYNHGQMRRDFTYIDDIVESVFRLQEVIPQADK DWTVEAGSPATSSAPYRVYNIGNSQPVTLMDYIGALESALGTVADKNMLQMQPGDVVDTSADISALYKAIGFKPQTSVKE GVARFVSWYKEFYHK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-98 | 57 |
