Gene Information

Name : hemC (EAMY_0187)
Accession : YP_003529545.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 222350 - 223291 bp
Length : 942 bp
Strand : -
Note : Tetrapyrrole biosynthesis, hydroxymethylbilane synthase, porphobilinogen deaminase, dipyromethane cofactor binding

DNA sequence : 
ATGTCAGACAAAATTTTAAGAATTGCCACCAGGAAAAGTCCGCTAGCTCTATGGCAGGCTAAATATGTGCAACAGCGTTT
AATCGACTGTCATCCGCGGCTACGCGTTGAGCTGGTGCCGATGGTGACGCGTGGAGATGTGATCCTTGATACGCCACTGG
CAAAAGTGGGCGGCAAAGGGCTGTTCGTGAAAGAACTGGAAAATGCCATGCTGTCGGGTCATGCAGACATTGCCGTGCAC
TCAATGAAAGATGTCCCGGTTGCCTTCCCGCAAGGGCTGGGACTGGTCGCTATCTGCGAGCGTGACGACCCACACGATGC
ATTTGTTTCAAATCACTATGCATCGGTAGACTCACTGCCAGCGGGCGCAATTGTTGGCACATCCAGCCTGCGGCGTCAGT
GTCAGCTTAGCGCCCGCCGCCCGGATCTGGTCATCCACTCCCTGCGTGGGAATGTGGGGACCCGTCTCGGTAAACTGGAT
GCGGGAGAATATGATGCCATTATATTAGCCGTCGCCGGGTTAAAACGACTGGGCCTGAGCGGTCGTATCCGTCAGGTGAT
GCCTGCTGAAGAGTCACTGCCCGCCGTTGGCCAGGGCGCGGTCGGTATTGAATGCCGTCTCGATGATATGCGCACGATCG
GTTTACTCGCTGCGTTGAATCACGATGATACCGCCTGCCGGGTTAGCGCAGAACGTGCCATGAATACCCGTCTGGAGGGC
GGTTGTCAGGTGCCTATCGGCAGTTATGCACTGCTGGAGGGAGATCGACTGTGGCTGCGTGGGTTAGTTGGCTCACCGGA
CGGTAGCCAGATGGTACGCGGCGAACGCCGTGGTTCGCGAGCGGATGCCGAAAAAATGGGCATCTCACTGGCCGAAGAGC
TGCTGGATAATGGCGCGCGCGACATTCTCGCCGCCGTTTATCAGGGAAATCCGCCAGCATGA

Protein sequence : 
MSDKILRIATRKSPLALWQAKYVQQRLIDCHPRLRVELVPMVTRGDVILDTPLAKVGGKGLFVKELENAMLSGHADIAVH
SMKDVPVAFPQGLGLVAICERDDPHDAFVSNHYASVDSLPAGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLD
AGEYDAIILAVAGLKRLGLSGRIRQVMPAEESLPAVGQGAVGIECRLDDMRTIGLLAALNHDDTACRVSAERAMNTRLEG
GCQVPIGSYALLEGDRLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNGARDILAAVYQGNPPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-82 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-82 61