Gene Information

Name : tpx (EAMY_1870)
Accession : YP_003531228.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1936672 - 1937175 bp
Length : 504 bp
Strand : +
Note : Thioredoxin fold, Redoxin

DNA sequence : 
ATGTCTCAGACCGTACATCTTCAGGGCAATCCGGTCTCCGTGGATGGCCAGCTGCCAACCCCGGGCCAGACGGCAAAACC
GTTTACTCTGGTAGCCAAAGACCTTTCAGATGTCTCACTGTCCCATTACGCGGGCAAACGCAAGGTGTTGAATATTTTCC
CCAGCGTTGATACGGGCTTGTGTGCTACTTCCGTACGCAAATTTAACCAGCTGGCCAGTGAAATCGATAATGCCGTGGTA
TTGTGCATCTCTGCCGACCTGCCGTTTGCCCAATCACGCTTTTGCGGCTCAGACGGTTTGAACAACGTAGTGACCCTCTC
CACTCTGCGCGGCCACGTCTTCCTGAAAGACTATGGCGTGGCGATCGTCGAAGGGCCGTTAAGCGGCCTGGCGGCCCGTG
CAGTCATCGTTCTGGACGAAAATGATCGGGTCATTCATAGCCAGCTGGTTAATGAAATCTCTACTGAACCGGATTACGAT
GCGGCCCTGGCCGCCTTGAAATAG

Protein sequence : 
MSQTVHLQGNPVSVDGQLPTPGQTAKPFTLVAKDLSDVSLSHYAGKRKVLNIFPSVDTGLCATSVRKFNQLASEIDNAVV
LCISADLPFAQSRFCGSDGLNNVVTLSTLRGHVFLKDYGVAIVEGPLSGLAARAVIVLDENDRVIHSQLVNEISTEPDYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 6e-33 48
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-33 48
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 4e-33 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-33 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_003531228.1 thiol peroxidase VFG0087 Protein 8e-34 48