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Name : rob1 (EAMY_1795) Accession : YP_003531153.1 Strain : Erwinia amylovora CFBP1430 Genome accession: NC_013961 Putative virulence/resistance : Resistance Product : regulatory protein pocR Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 1857230 - 1857571 bp Length : 342 bp Strand : + Note : Helix-turn-helix, AraC type, Bacterial regulatory helix-turn-helix proteins, AraC family DNA sequence : ATGAGTCATGATGATTTTATAAGCGATCTTGTGCAGTGGATAGACAACCATATCGAAGGAAAGATGGATTTAGATACCGT TGCCGATCGAGCCGGCTATTCTAAATGGCACCTGCAACGCATGTTCAAACAGCACACCGGTTATGCACTGGGCGAATACA TTCGTCAACGCCGCCTGAAAAAATCTGCAGAGCGCCTTGCACGCGGCGGTGAGCCTATCCTTGATGTGGCAATCAGTTTT GGCTTCGACTCGCAGCAGTCCTTCAACCGCAGTTTTAAACGCCAGTTCGGACAGTCACCCGGGGCCTGGCGGCGTCAGGT ACGTAGCGCCGTGCATGCCTGA Protein sequence : MSHDDFISDLVQWIDNHIEGKMDLDTVADRAGYSKWHLQRMFKQHTGYALGEYIRQRRLKKSAERLARGGEPILDVAISF GFDSQQSFNRSFKRQFGQSPGAWRRQVRSAVHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 3e-24 | 48 |
| tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 1e-20 | 46 |
| tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 1e-20 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rob1 | YP_003531153.1 | regulatory protein pocR | BAC0371 | Protein | 7e-25 | 49 |
| rob1 | YP_003531153.1 | regulatory protein pocR | NC_002695.1.914293.p | Protein | 7e-25 | 49 |
| rob1 | YP_003531153.1 | regulatory protein pocR | CP001138.1.gene4488. | Protein | 8e-25 | 48 |
| rob1 | YP_003531153.1 | regulatory protein pocR | CP000647.1.gene4499. | Protein | 2e-25 | 48 |
| rob1 | YP_003531153.1 | regulatory protein pocR | CP000034.1.gene4505. | Protein | 1e-24 | 48 |
| rob1 | YP_003531153.1 | regulatory protein pocR | CP001918.1.gene327.p | Protein | 3e-25 | 48 |
| rob1 | YP_003531153.1 | regulatory protein pocR | CP000647.1.gene1624. | Protein | 5e-24 | 47 |
| rob1 | YP_003531153.1 | regulatory protein pocR | CP001918.1.gene2033. | Protein | 8e-24 | 47 |
| rob1 | YP_003531153.1 | regulatory protein pocR | CP001138.1.gene1637. | Protein | 1e-23 | 46 |
| rob1 | YP_003531153.1 | regulatory protein pocR | BAC0560 | Protein | 1e-23 | 46 |
| rob1 | YP_003531153.1 | regulatory protein pocR | NC_002695.1.917339.p | Protein | 1e-23 | 46 |
| rob1 | YP_003531153.1 | regulatory protein pocR | CP000034.1.gene1596. | Protein | 1e-23 | 46 |
| rob1 | YP_003531153.1 | regulatory protein pocR | NC_010558.1.6276025. | Protein | 4e-21 | 46 |
| rob1 | YP_003531153.1 | regulatory protein pocR | CP001138.1.gene612.p | Protein | 3e-22 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rob1 | YP_003531153.1 | regulatory protein pocR | VFG0585 | Protein | 7e-25 | 48 |
| rob1 | YP_003531153.1 | regulatory protein pocR | VFG1038 | Protein | 4e-21 | 46 |
