Gene Information

Name : ynfL (EAMY_1739)
Accession : YP_003531097.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Unknown
Product : HTH-type transcriptional regulator YnfL
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 1802792 - 1803721 bp
Length : 930 bp
Strand : +
Note : LysR, substrate-binding, LysR substrate binding domain

DNA sequence :
ATGATACTTCAGAGATATGAATTAAGAGATATGAATATGGAATTGCGTCATCTGCGCTATTTTATCGCCGTAGCGGAAGA
ACTGCATTTTGGTCGTGCTGCACTTCGGCTTAATATCTCACAACCGCCGCTTAGTCAGCAGATCCAACTGCTTGAGCAGG
AAATAGGTGCGCGATTATTCGCCCGCACCAATCGTAGCGTGCGGCTAACTGCGGCCGGTGAGCAATTTTACAAGGATGCC
AGCCTCATCCTGCAGCAGGTTGGCCAGGCGGCTGACAAAGCGGCGAGACTGCATCGCGGGGATGAAGGGGAGTTGCGTAT
CGGATTTACCTCATCCGCTCCGCTGATTAACGCGGTGTCAAATGCCCTGTTTACCTTCCGTCAGCGTTACCCGGCGGTTC
ATGTCGAAATGCAGGAGATAAACACGCGTCAACAGCTGGCTCCGCTCAGTGATGGGCGACTTGATTTAGGCGTCATGCGC
AACACCGTGCTGCCTGAAACTTTTCATCATCAGGTACTGCTACAGGAGCCAATGTATGCACTGGTGCACCGTGCGCACCG
CCTGGCAAACCGACAGCAGATCGCGTTAAGTGAACTGACGCTGGAGCCATTCGTGTTCTTCGACCCGGGCGTAGGCACCG
CCCTTTACGACGAAATCATCCGGCTGCTGCAACGGTATGATATCCAGCCTGATATTGCCCAGGAAGTGGGGGAGGCGATG
ACCATTATTGGTTTAGTTTCAGGCGGGCTGGGCGTTTCGATTCTCCCAGCGTCATTTCACCGGGTGCGGCTGAATGATGT
TGTGTGGATCCCCCTGAAAGAGCAGGATGCGCGTTCAGAAGTTTGGCTGGTGTGGTCCAGGCAACGAGAAATGCCTGCGG
TAGCTGCTGCCATGAAGGAATTATTACTGCCGTCTGGCACAAATTCGTAA

Protein sequence :
MILQRYELRDMNMELRHLRYFIAVAEELHFGRAALRLNISQPPLSQQIQLLEQEIGARLFARTNRSVRLTAAGEQFYKDA
SLILQQVGQAADKAARLHRGDEGELRIGFTSSAPLINAVSNALFTFRQRYPAVHVEMQEINTRQQLAPLSDGRLDLGVMR
NTVLPETFHHQVLLQEPMYALVHRAHRLANRQQIALSELTLEPFVFFDPGVGTALYDEIIRLLQRYDIQPDIAQEVGEAM
TIIGLVSGGLGVSILPASFHRVRLNDVVWIPLKEQDARSEVWLVWSRQREMPAVAAAMKELLLPSGTNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
stmR AAK97547.1 StmR Not tested SPI-6 Protein 3e-33 41