Gene Information

Name : yjdB (EAMY_1696)
Accession : YP_003531054.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 1760994 - 1762634 bp
Length : 1641 bp
Strand : -
Note : Sulphatase, Sulfatase

DNA sequence :
ATGAAATCCTTTTTAAACAAGCTGTACTTTAACGAAATCACCTTTAATTGTGGCGCGGCGACATTTTTTACCCTGGCGCT
GAATTATGGTTTCCTGCTTCGCGCCTGGCAAACTATCCCTTTTCATAATTTGCTCGATTATCTTTACGCCGCATCCATCC
CGGTGGTTCTGTTTTGTGCGTTTCTGGCTATCTTCAATTTCCTCGCAGTGCCCTGGCTGCGTAAACCCCTGCTGGCCGTG
TTGATTGTCGCCAGCGCCGCCGCTAACTATTTTATGCTCAACTTCGGCACGGTTATCGATACCAACATGATACAGAATGT
ATTCGAAACCGATTTGCAGGAAGCCAGCGCGCTTTTGAGCTTTCGCTATCTTTTATGGTTGCTGCTGCTGGGTGTACTTC
CGGCTGCCATTTTGTGCCTGTGCCGCATCAAAAATAACCGGCCATGGTGGAAGTCAGTTGTCTGGCGGCTACTGACTTCT
CTGGTGGCCCTTCTGTTAATTGTTACTGTAGCCGCGTTTTTTTACAAAGATTACGCATCTATGTTTCGCAATAACAAAGG
ACTGGTCAAAATGGTCACCCCGGTTAACGTGGTAAGCGGTATCGGACGTTATGTTAACAGTCACTGGTTCACCGGAAATC
AGGAGCTGATTGCCATCGGACGGGATGCAAAGAAAGTGAAAGTGATTACCGACAGCAAAAAGAAAACGCTGGTGGTCTTC
GTGCTCGGCGAGACGGCGCGGGCTGAAAATTTCTCGCTGGGTGGCTATACGCGAGAAACCAATCCGAAATTACAGCGCGA
TAACGTTATTTATTATCAGCATGCCACATCCTGCGGTACAGAAACGGCCATCTCTGTTCCCTGCATGTTTTCCAATATGT
CACGCCAAAACTATGACGCCAGCCTGGCACGTCATCAGGAAGGTGTACTTGATGTGATGGCTCACGCTGGTATCAATGTA
TTGTGGCGTGAGAATGACGGCGGCTGCAAAGGTGCCTGCGACCGCGTGCCGCATAGCGATATGACCAAATGGCAGGTTAG
TGAGTTGTGCAAAAGCGATTTTTGCCTGGATGATGTGCTTTTGCATCGGCTAAATAATTACATCGACGGTATCAAAGACG
ATTCTGTCATAGTGCTCCATCAAATGGGGAGTCATGGCCCCGCTTATTATTTGCGCTACCCGCCAGAAGCACGCCAGTTC
ACACCAACCTGTGACAGCAATCAGATCCAGGATTGCGATCGCCAGACGCTGATTAACACCTATGACAATACCATTTTGTA
TACCGATACAATGCTGGACAACACTATCAATCTGTTAAAAGCATACAATGACAAATTCAACCTGGCGATGATTTACCTTT
CTGACCACGGTGAATCACTGGGCGAACGTGGAATGTACCTTCACGGCACTCCTTATCTGTTTGCCCCGTCTCAACAAACA
CATATTCCTTTCTTACTTTGGATGTCGCCCGACTATGCCACAACATTTGGCATCGATCTGCAGTGTCTGCAACAGCGGGC
TAAGGTTGAGGATGTCTCTCAGGACAACATTTTTCATACCCTGTTAGGAATGATGGATGTAGAAACGCAAGAGTATAAAC
CAGAGCTTGATATGATCCGTTCGTGCCGCAACCACGGCTGA

Protein sequence :
MKSFLNKLYFNEITFNCGAATFFTLALNYGFLLRAWQTIPFHNLLDYLYAASIPVVLFCAFLAIFNFLAVPWLRKPLLAV
LIVASAAANYFMLNFGTVIDTNMIQNVFETDLQEASALLSFRYLLWLLLLGVLPAAILCLCRIKNNRPWWKSVVWRLLTS
LVALLLIVTVAAFFYKDYASMFRNNKGLVKMVTPVNVVSGIGRYVNSHWFTGNQELIAIGRDAKKVKVITDSKKKTLVVF
VLGETARAENFSLGGYTRETNPKLQRDNVIYYQHATSCGTETAISVPCMFSNMSRQNYDASLARHQEGVLDVMAHAGINV
LWRENDGGCKGACDRVPHSDMTKWQVSELCKSDFCLDDVLLHRLNNYIDGIKDDSVIVLHQMGSHGPAYYLRYPPEARQF
TPTCDSNQIQDCDRQTLINTYDNTILYTDTMLDNTINLLKAYNDKFNLAMIYLSDHGESLGERGMYLHGTPYLFAPSQQT
HIPFLLWMSPDYATTFGIDLQCLQQRAKVEDVSQDNIFHTLLGMMDVETQEYKPELDMIRSCRNHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 7e-85 43
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 7e-85 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yjdB YP_003531054.1 hypothetical protein BAC0485 Protein 7e-112 49