Gene Information

Name : spaT3 (EAMY_1590)
Accession : YP_003530948.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : type III secretion chaperone SpaT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1650580 - 1651137 bp
Length : 558 bp
Strand : +
Note : Chaperone protein sicA (Salmonella invasin chaperone). Type III secretion low calcium response chaperone LcrH/SycD

DNA sequence : 
ATGGAATATGAGAATATGGCGGAAGATTCGAACTCTCAAGATCCATCGAAAAATGACGATGAACTGGAAGAATATTCCGC
AAATCTAATTGAAGCGATCCAGAATGGAGCCGTCCTTAAAGATGTGCAGTGTGTTTCGAATGGTACGATGAATGATATTT
ATAAAATAGCATATGAATTTTATCATATTGGGAGATTAGACGACGCAATATCTCTTTTTCGTTTTTTATGTATCTATGAT
TTTTATAATTCCGAATATGCCATGGGCCTCGCAGCAGTTTATCATTTGAAAAAGGACTTCCGCAAAGCAATTGATTTCTA
TGCTTTGTCATATTCTTTGTCTAAGGAGGACTATCGGCCTATGTTTTATGCAGGTCAGTGTAATCTAATGTTACGTCAAG
AGGTTTTGGCTCGCAAATGTTTTGCTATTGTAATGAACAGGTGCACCGATCTGCAGCTTAAAGAAAAAGCTGAAACCTAT
CTGTCAGCACTCGATGAAATCAATGCGGATACTAAAAGTGATTGTGAAGACAAAAAAAACAAACAGGAGGAACAATGA

Protein sequence : 
MEYENMAEDSNSQDPSKNDDELEEYSANLIEAIQNGAVLKDVQCVSNGTMNDIYKIAYEFYHIGRLDDAISLFRFLCIYD
FYNSEYAMGLAAVYHLKKDFRKAIDFYALSYSLSKEDYRPMFYAGQCNLMLRQEVLARKCFAIVMNRCTDLQLKEKAETY
LSALDEINADTKSDCEDKKNKQEEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaT NP_457280.1 unknown function Virulence SPI-1 Protein 9e-38 51
spaT NP_806489.1 hypothetical protein Virulence SPI-1 Protein 9e-38 51
sicA NP_461807.1 secretion chaperone Virulence SPI-1 Protein 9e-38 51
sicA YP_217805.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 9e-38 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaT3 YP_003530948.1 type III secretion chaperone SpaT VFG2451 Protein 4e-45 53
spaT3 YP_003530948.1 type III secretion chaperone SpaT VFG0547 Protein 2e-38 51
spaT3 YP_003530948.1 type III secretion chaperone SpaT VFG0988 Protein 2e-38 48
spaT3 YP_003530948.1 type III secretion chaperone SpaT VFG1769 Protein 2e-36 43