Gene Information

Name : spaQ3 (EAMY_1587)
Accession : YP_003530945.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein spaQ
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 1648293 - 1648547 bp
Length : 255 bp
Strand : +
Note : fliQ_rel_III: type III secretion protein, HrpO family

DNA sequence :
ATGAACAATACGTTATTTATAAGCAATGCTGCTTTAGTTGTTGTATTAAAACTGACAGCAGTACCTGTTGCATTTGCTAC
CCTGGTTGGAATCGTCGTTGGTCTTTTTCAAACAATTATGCAAATACAGGAGCAAACTTTACCTTTTGGTTTGAAAATGT
TGGCAGTATTTGCAAGTATCTTCATGTTAATTGAGTGGTTTTCTGCTGAGATGTTGAATTTTGCTAATCAAGCGTTCTCA
ATGGCTTTGAATTAA

Protein sequence :
MNNTLFISNAALVVVLKLTAVPVAFATLVGIVVGLFQTIMQIQEQTLPFGLKMLAVFASIFMLIEWFSAEMLNFANQAFS
MALN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaS AAS66847.1 YsaS Not tested SSR-1 Protein 2e-15 66
spaQ AAS66866.1 SpaQ Not tested SSR-2 Protein 3e-13 52
epaQ AAZ31292.1 EpaQ Virulence ETT2 Protein 2e-09 44
ECs3724 NP_311751.1 EpaQ Not tested LIM Protein 3e-09 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaQ3 YP_003530945.1 surface presentation of antigens protein spaQ VFG1772 Protein 3e-13 48