Gene Information

Name : ybgA (EAMY_1156)
Accession : YP_003530514.1
Strain : Erwinia amylovora CFBP1430
Genome accession: NC_013961
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1221397 - 1222353 bp
Length : 957 bp
Strand : +
Note : Protein of unknown function DUF523, Protein of unknown function (DUF1722)

DNA sequence : 
ATGGATAAGAAAATTCCGGTTGGCATCAGTGCCTGTCTGTTGGGCGAGCGCGTGCGCTTTGATGGTGGGCACAAACGCTG
CGAATTTGCCGCACAGCAGCTGGCACCTTTTTTGCGTTATGAACCAATATGCCCGGAAATGGCAATTGGATTGCCAACCC
CACGTCCTGCACTGCGCCTGACCGAAGCCGCTCAGGGGGATATTTCGCTCAGTTTTAGCAACGGCAGCGACCTTCCCGTC
ACCGAAAAGATGCAGGCCTTTTCCGAGGAAAAAATCAGCCAGTTGCACCATCTTTGCGGCTATATCGTCTGCGCTAAATC
CCCCAGCTGCGGGATGGAACGGGTGCGCATCTATCAACCGGACAATAATAATAACCGCAAGGCCGGAACCGGGGTGTTTA
CCCGCGAACTGATGGCGCAGATGCCCTGGCTGCCGGTTGAGGAGGACGGCCGCCTGCACGATCCGCTGCTGCGCGAAAAC
TTTGTTGCACGCGTCTATGCCCTGCACGAGTTTAACCGGCTATGGCGCAGTGGGCTGACGCGCGCCAAACTGATGGCGTT
TCACACCCGATATAAACTGCTGCTGTTGGCTCATTCCCAGCCGGATTATCGTCAGATAGGGCCTTTTGTCGCCAAAATGG
ACCAGTGGGCGTCGCTGGAGGCGTTTGCCGCCGAGTACCGGCAGCGGCTGATGGATCTGATGCAGCATCCGGCAACGCGC
AGCAACCACACCAATGTGCTGATGCATGTACAGGGGTACTTCCGCCGCGAGCTGACTTCAGCCCAGCGTCAGGAGCTGGC
AGGAGTGATCGATGATTACCGTCAACAGCTGTTACCGCTGCTGGCACCGATAACCCTGCTGAAACACTATATGACGCAAT
TCCCGCACCCGTGGCTGGCGGAGCAGCGCTATTTCGCGCCGTACCCGGAAGTGCTGCGTCTGCGTTACGGACACTGA

Protein sequence : 
MDKKIPVGISACLLGERVRFDGGHKRCEFAAQQLAPFLRYEPICPEMAIGLPTPRPALRLTEAAQGDISLSFSNGSDLPV
TEKMQAFSEEKISQLHHLCGYIVCAKSPSCGMERVRIYQPDNNNNRKAGTGVFTRELMAQMPWLPVEEDGRLHDPLLREN
FVARVYALHEFNRLWRSGLTRAKLMAFHTRYKLLLLAHSQPDYRQIGPFVAKMDQWASLEAFAAEYRQRLMDLMQHPATR
SNHTNVLMHVQGYFRRELTSAQRQELAGVIDDYRQQLLPLLAPITLLKHYMTQFPHPWLAEQRYFAPYPEVLRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 5e-92 59
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 8e-92 59
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 8e-92 59
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 7e-92 59
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 7e-92 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybgA YP_003530514.1 hypothetical protein VFG0490 Protein 3e-92 59