Gene Information

Name : Nhal_0930 (Nhal_0930)
Accession : YP_003526491.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 943311 - 944231 bp
Length : 921 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: noc:Noc_2255 tyrosine recombinase XerD

DNA sequence : 
GTGCCCGGAAGTCCTGAAAAGGTACGCCTAGCGGCTGACCAAAGACAGCTGGAATATTTTCTGGATGCCCTTTGGTTAGA
GGAAGGATTAGCCGAGAACACCTTAGCGGCTTATCGCCGGGATCTAGAGGGGTTTTCCCGGTGGTTGTACCCCCAGGGGC
GAACATTGGTCGAGGCGCAACGGGAGGATCTGCTGGCCTATCTGGCACACCGTTTGGAGCGGAGTCACAAAGCTCGGAGT
GCGGCCCGCTCTGTCTCTAGCCTGCGCCGTTTTTATCGCTATCTGGTGCGGGAGAAAGTCCGCGACAGTGACCCGAGTGA
CCGGGTTGAAGCTCCTCGGCTGGGGAGACCCTTACCCGAGTCCTTGAGTGAAGAAGAAGTGGAAGCACTGCTGGCCGCCC
CAGAAGTCAACTGTAATTTAGGGCTGCGGGATCGGGCAATGCTGGAAACCCTCTATGCTACCGGGTTGCGGGTTTCTGAA
TTGGTCCATTTAACCTTGCCTCAACTAAATCTCCGGCAGGGAGTCGTGCGTTTAAGCGGTAAAGGCAATAAAGAACGCCT
TGTGCCTTTAGGTGAAGTGGCATTGAGCTGGCTCGAGTGTTATTCCCGTGAAGCGCGTCCGGGATTAATCAAGGCTCAGA
TGAGTGAAATTTTATTCCTGACCCGACGCGGGGGCGCTATGACCCGGCAAGCTTTCTGGTATTTGATTAAGCGTTATGCC
CGCCAGGCCGGTGTCCGGAAAGCGCTCTCGCCTCATACCTTGCGCCACGCTTTTGCGACTCATCTTCTCAACCATGGGGC
GGATCTGCGGGTAGTGCAGATGTTGCTCGGGCATGCGGATCTTTCCACTACCCAGATTTACACTCATGTGGCGAGGGCTC
GTTTACAGCAGCTCCATCAACAGCACCATCCCCGTGGATAA

Protein sequence : 
MPGSPEKVRLAADQRQLEYFLDALWLEEGLAENTLAAYRRDLEGFSRWLYPQGRTLVEAQREDLLAYLAHRLERSHKARS
AARSVSSLRRFYRYLVREKVRDSDPSDRVEAPRLGRPLPESLSEEEVEALLAAPEVNCNLGLRDRAMLETLYATGLRVSE
LVHLTLPQLNLRQGVVRLSGKGNKERLVPLGEVALSWLECYSREARPGLIKAQMSEILFLTRRGGAMTRQAFWYLIKRYA
RQAGVRKALSPHTLRHAFATHLLNHGADLRVVQMLLGHADLSTTQIYTHVARARLQQLHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-51 64
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-51 64