|
Name : Nhal_0887 (Nhal_0887) Accession : YP_003526450.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 899821 - 900303 bp Length : 483 bp Strand : + Note : TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: noc:Noc_1198 SsrA-binding protein DNA sequence : ATGGCTAAAAGCAAAAAGAAACAGTCCGGTACTCCAAGCAATACCATTGCCCTAAACCGGAAGGCCCGCCACGATTATTT CATCGAGGAGCGTTACGAGGTGGGTCTCGCCCTGGAGGGTTGGGAGGTCAAAAGCCTGCGGGCGGGGCGGGTGCAACTGA GCGAGAGTTACTGCCTTCTCAAAGGGGGGGAGGCGTGGCTGTTCGGCGCTCATATTACCCCTTTAAACACGGCCTCGACC CATATCCGCCCGGATCCCCTTCGAACCCGAAAATTGCTCCTCCATAGCGAAGAACTGCGTAAACTCATTGGGGCGGTGGA ACGCAAGGGCTACGCTTTGGTGCCCCTGGCTTTATATTGGAAGCGGGGGCGGGTAAAATTGGAGATTGCTTTGGCCAAGG GTAAGCATAAGTACGACAAGCGTGCGGTTGAAAGGGAGAAAGAGTGGTCTCGGCAAAAAGAGCGGCTGCTAAAGATTCGT TAG Protein sequence : MAKSKKKQSGTPSNTIALNRKARHDYFIEERYEVGLALEGWEVKSLRAGRVQLSESYCLLKGGEAWLFGAHITPLNTAST HIRPDPLRTRKLLLHSEELRKLIGAVERKGYALVPLALYWKRGRVKLEIALAKGKHKYDKRAVEREKEWSRQKERLLKIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 9e-38 | 54 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-25 | 47 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 2e-22 | 47 |
