Gene Information

Name : Nhal_0760 (Nhal_0760)
Accession : YP_003526327.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 774101 - 776239 bp
Length : 2139 bp
Strand : +
Note : KEGG: noc:Noc_1216 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicase ; helicase

DNA sequence :
ATGCCATTGTCCATCTTGGCGACTGAGAAACCCTCGCTTACTCAGGAACAGGGTGACCCAAACCCGCTCACCTTGAGCAC
TCCGGTAACCGCGCTCAAGGGCGTGGGGCCCAACTTGGCTAGGCGGCTTGCAAGATTGGGCCTTTCCAAGGTCCAGGACT
TGCTCTTTCACCTCCCCCAGCGCTACCAGGATCGAACCCAATTGGTGCCCATAGGGGCCTTGCAGATAGGCAGGGAAGCC
TTGATTGAGGGCGAAATTCAGCTGAGCGAGATCCGCCAGGGTCGCCGCCGTTCTCTGGTTTGCGCCGTCAGTGATGGCAC
TGGGGAGATTTTCCTGCGTTTTTTCCATTTCTCAACCTGGCAGCAAAATTCCTTGACGCCAGCAATCCGGTTACGTTGTT
TTGGTGAAGTACGACAGGGCGCCGGACGGCTGGAAATGGTTCATCCTGAATATCGTCGTCTCCTGGGGGAGGAGGCGGAG
GCAATCGAGGTCCACCTTACCCCCATTTACCCCACCACGGAAGGGTTGCGCCAACCCCTCCTCAGGGATCTGATCCAAGG
GGTGCTCAAGGATCTTGGCGAGGAGGGAATCATCGATCACCTGCCGCCGACATTCCTAGAAGGGATCGGTTTGCCGACTT
TGAGTCAAGCGATTGTCTATCTTCACCAGCCGCCACCGGATGCCCCCTTAGATGTGTTGGCTGAGGGGAAGCACCCTGTC
CAGCAACGCCTGGCCTTTGAAGAATTGCTGGCGCACCATTTGAGCCTGCGGCAATTGCGCTTACGGGCCACCCAACTGCA
GGCACCGTCGCTAGCCAGTGAAGGGCAATTGCAAAAACGTTTTTTGGCGGCGCTTTCCTTTCCCTTAACGGCGGCCCAGG
AGCGAGTCGTCCAAGAAATCCTGGAGGATATGGCCCGGGACTCGCCCATGCAGCGCCTGCTTCAGGGGGACGTGGGCTCC
GGCAAGACGGTGGTGGCCGCCTTGGCGATTTTACAGGCGGTTGAGGCCGGTCACCAGGCGGCGTTGATGGCGCCTACCGA
GCTGCTGGCGGAACAGCATCTACGGGTTTTACAACGTTGGTTTTCCCCTTTTGAGATCAATGTGGAATGGCTAGCCGCTA
AAGGGGCCGCAAAGGGACGGCGGGAAAGTTTGAATCGGCTCAAAAGCGGGGAAGCGCAGGTGGCGGTGGGAACCCATGCC
CTGTTTCAGGAAGGGGTCAATTTTCATCATCTGGGGTTGGTGGTGGTCGATGAACAACACCGTTTTGGCGTTGAGCAGCG
GCTAGCACTCCGGGAAAAAGGCCGCCATGGCGCCTATTGTCCCCATCAGTTGATTATGACCGCCACGCCCATCCCGCGAA
CCCTAGCCATGACGGCCTATGCCGATCTGGACACCTCGGTGATTGACCAATTACCGCCTGGGCGTATCCCCGTCGCCACA
GCAGCCGTCTCCCATCGCCGCCGAACCGAAGTGGTGGTCAAAGTGCGCCGGGCCTGCCAGGCAGGGAGACAGGCCTATTG
GGTGTGTACGCTGATTGAAGAATCCGACAGCTTGCAGGCTCAGGCGGCGGAGAAGACCGCAGCGGAGCTGGCCGAAGTAT
TGCCTGAATTGCGCATTGGGCTCATCCACGGACGGATGAAGCCCCCGGACAAGGAAAGCACCATGGCCGCTTTCAAGTCC
GGGGCGATTCATCTCCTGGTCGCCACCACGGTTATTGAAGTGGGGGTTGATGTCCCCAATGCTAGCCTGATGATTATTGA
GAATGCCGAGCGTCTGGGGCTTTCCCAGTTGCATCAGTTGCGGGGCCGGGTCGGTCGCGGCGCGGCGGATAGTTATTGTG
TCCTGTTGTACCATGGACCATTGTCCGAATTGAGCCGGGCCCGGTTGGCTTGTTTGCGGGCCACTAACGATGGCTTTGAG
ATCGCACGCCGTGACCTTGAGCTTCGAGGTCCGGGTGAGGTCTTGGGAACTCGCCAAACGGGCCTGCCCCAGTACCGGGT
CGCTGATCTTCTGCGGGACCAGGATCTGTTAGCGCGGGTGGGGCGAGTGGCAGATCGCTTCCAACGGCAATATCCTGCCC
AAGCGGAAGCTTTAATTCGCCGCTGGCTAGGGGAAGAAAGCCATTACGGGGAAGTGTAA

Protein sequence :
MPLSILATEKPSLTQEQGDPNPLTLSTPVTALKGVGPNLARRLARLGLSKVQDLLFHLPQRYQDRTQLVPIGALQIGREA
LIEGEIQLSEIRQGRRRSLVCAVSDGTGEIFLRFFHFSTWQQNSLTPAIRLRCFGEVRQGAGRLEMVHPEYRRLLGEEAE
AIEVHLTPIYPTTEGLRQPLLRDLIQGVLKDLGEEGIIDHLPPTFLEGIGLPTLSQAIVYLHQPPPDAPLDVLAEGKHPV
QQRLAFEELLAHHLSLRQLRLRATQLQAPSLASEGQLQKRFLAALSFPLTAAQERVVQEILEDMARDSPMQRLLQGDVGS
GKTVVAALAILQAVEAGHQAALMAPTELLAEQHLRVLQRWFSPFEINVEWLAAKGAAKGRRESLNRLKSGEAQVAVGTHA
LFQEGVNFHHLGLVVVDEQHRFGVEQRLALREKGRHGAYCPHQLIMTATPIPRTLAMTAYADLDTSVIDQLPPGRIPVAT
AAVSHRRRTEVVVKVRRACQAGRQAYWVCTLIEESDSLQAQAAEKTAAELAEVLPELRIGLIHGRMKPPDKESTMAAFKS
GAIHLLVATTVIEVGVDVPNASLMIIENAERLGLSQLHQLRGRVGRGAADSYCVLLYHGPLSELSRARLACLRATNDGFE
IARRDLELRGPGEVLGTRQTGLPQYRVADLLRDQDLLARVGRVADRFQRQYPAQAEALIRRWLGEESHYGEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-96 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nhal_0760 YP_003526327.1 ATP-dependent DNA helicase RecG BAC0356 Protein 1e-176 61