Name : Nhal_0760 (Nhal_0760) Accession : YP_003526327.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 774101 - 776239 bp Length : 2139 bp Strand : + Note : KEGG: noc:Noc_1216 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicase ; helicase DNA sequence : ATGCCATTGTCCATCTTGGCGACTGAGAAACCCTCGCTTACTCAGGAACAGGGTGACCCAAACCCGCTCACCTTGAGCAC TCCGGTAACCGCGCTCAAGGGCGTGGGGCCCAACTTGGCTAGGCGGCTTGCAAGATTGGGCCTTTCCAAGGTCCAGGACT TGCTCTTTCACCTCCCCCAGCGCTACCAGGATCGAACCCAATTGGTGCCCATAGGGGCCTTGCAGATAGGCAGGGAAGCC TTGATTGAGGGCGAAATTCAGCTGAGCGAGATCCGCCAGGGTCGCCGCCGTTCTCTGGTTTGCGCCGTCAGTGATGGCAC TGGGGAGATTTTCCTGCGTTTTTTCCATTTCTCAACCTGGCAGCAAAATTCCTTGACGCCAGCAATCCGGTTACGTTGTT TTGGTGAAGTACGACAGGGCGCCGGACGGCTGGAAATGGTTCATCCTGAATATCGTCGTCTCCTGGGGGAGGAGGCGGAG GCAATCGAGGTCCACCTTACCCCCATTTACCCCACCACGGAAGGGTTGCGCCAACCCCTCCTCAGGGATCTGATCCAAGG GGTGCTCAAGGATCTTGGCGAGGAGGGAATCATCGATCACCTGCCGCCGACATTCCTAGAAGGGATCGGTTTGCCGACTT TGAGTCAAGCGATTGTCTATCTTCACCAGCCGCCACCGGATGCCCCCTTAGATGTGTTGGCTGAGGGGAAGCACCCTGTC CAGCAACGCCTGGCCTTTGAAGAATTGCTGGCGCACCATTTGAGCCTGCGGCAATTGCGCTTACGGGCCACCCAACTGCA GGCACCGTCGCTAGCCAGTGAAGGGCAATTGCAAAAACGTTTTTTGGCGGCGCTTTCCTTTCCCTTAACGGCGGCCCAGG AGCGAGTCGTCCAAGAAATCCTGGAGGATATGGCCCGGGACTCGCCCATGCAGCGCCTGCTTCAGGGGGACGTGGGCTCC GGCAAGACGGTGGTGGCCGCCTTGGCGATTTTACAGGCGGTTGAGGCCGGTCACCAGGCGGCGTTGATGGCGCCTACCGA GCTGCTGGCGGAACAGCATCTACGGGTTTTACAACGTTGGTTTTCCCCTTTTGAGATCAATGTGGAATGGCTAGCCGCTA AAGGGGCCGCAAAGGGACGGCGGGAAAGTTTGAATCGGCTCAAAAGCGGGGAAGCGCAGGTGGCGGTGGGAACCCATGCC CTGTTTCAGGAAGGGGTCAATTTTCATCATCTGGGGTTGGTGGTGGTCGATGAACAACACCGTTTTGGCGTTGAGCAGCG GCTAGCACTCCGGGAAAAAGGCCGCCATGGCGCCTATTGTCCCCATCAGTTGATTATGACCGCCACGCCCATCCCGCGAA CCCTAGCCATGACGGCCTATGCCGATCTGGACACCTCGGTGATTGACCAATTACCGCCTGGGCGTATCCCCGTCGCCACA GCAGCCGTCTCCCATCGCCGCCGAACCGAAGTGGTGGTCAAAGTGCGCCGGGCCTGCCAGGCAGGGAGACAGGCCTATTG GGTGTGTACGCTGATTGAAGAATCCGACAGCTTGCAGGCTCAGGCGGCGGAGAAGACCGCAGCGGAGCTGGCCGAAGTAT TGCCTGAATTGCGCATTGGGCTCATCCACGGACGGATGAAGCCCCCGGACAAGGAAAGCACCATGGCCGCTTTCAAGTCC GGGGCGATTCATCTCCTGGTCGCCACCACGGTTATTGAAGTGGGGGTTGATGTCCCCAATGCTAGCCTGATGATTATTGA GAATGCCGAGCGTCTGGGGCTTTCCCAGTTGCATCAGTTGCGGGGCCGGGTCGGTCGCGGCGCGGCGGATAGTTATTGTG TCCTGTTGTACCATGGACCATTGTCCGAATTGAGCCGGGCCCGGTTGGCTTGTTTGCGGGCCACTAACGATGGCTTTGAG ATCGCACGCCGTGACCTTGAGCTTCGAGGTCCGGGTGAGGTCTTGGGAACTCGCCAAACGGGCCTGCCCCAGTACCGGGT CGCTGATCTTCTGCGGGACCAGGATCTGTTAGCGCGGGTGGGGCGAGTGGCAGATCGCTTCCAACGGCAATATCCTGCCC AAGCGGAAGCTTTAATTCGCCGCTGGCTAGGGGAAGAAAGCCATTACGGGGAAGTGTAA Protein sequence : MPLSILATEKPSLTQEQGDPNPLTLSTPVTALKGVGPNLARRLARLGLSKVQDLLFHLPQRYQDRTQLVPIGALQIGREA LIEGEIQLSEIRQGRRRSLVCAVSDGTGEIFLRFFHFSTWQQNSLTPAIRLRCFGEVRQGAGRLEMVHPEYRRLLGEEAE AIEVHLTPIYPTTEGLRQPLLRDLIQGVLKDLGEEGIIDHLPPTFLEGIGLPTLSQAIVYLHQPPPDAPLDVLAEGKHPV QQRLAFEELLAHHLSLRQLRLRATQLQAPSLASEGQLQKRFLAALSFPLTAAQERVVQEILEDMARDSPMQRLLQGDVGS GKTVVAALAILQAVEAGHQAALMAPTELLAEQHLRVLQRWFSPFEINVEWLAAKGAAKGRRESLNRLKSGEAQVAVGTHA LFQEGVNFHHLGLVVVDEQHRFGVEQRLALREKGRHGAYCPHQLIMTATPIPRTLAMTAYADLDTSVIDQLPPGRIPVAT AAVSHRRRTEVVVKVRRACQAGRQAYWVCTLIEESDSLQAQAAEKTAAELAEVLPELRIGLIHGRMKPPDKESTMAAFKS GAIHLLVATTVIEVGVDVPNASLMIIENAERLGLSQLHQLRGRVGRGAADSYCVLLYHGPLSELSRARLACLRATNDGFE IARRDLELRGPGEVLGTRQTGLPQYRVADLLRDQDLLARVGRVADRFQRQYPAQAEALIRRWLGEESHYGEV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-96 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Nhal_0760 | YP_003526327.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 1e-176 | 61 |