Gene Information

Name : Nhal_0751 (Nhal_0751)
Accession : YP_003526318.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Virulence
Product : N-6 DNA methylase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 760222 - 762621 bp
Length : 2400 bp
Strand : +
Note : PFAM: N-6 DNA methylase; KEGG: psp:PSPPH_0107 type I restriction-modification system DNA methylase

DNA sequence :
ATGAACCACGCATTCCATAACAAATTGGTGTCCTTTATTTGGTCCATTGCCGACGATTGCCTGCGCGATGTGTACGTTCG
GGGCAAGTACCGGGATGTGATCCTGCCCATGGTGGTCTTGCGCCGCCTGGATGCCCTGCTTGAACCCACCAAGGCTGCCG
TGCTGGAGGAAGTCCGGTTCCAGCGCAAGGAGATGAAACTGACCGAGCTGGAGGACAGCGCCTTGCAGGCGGCCTCGGGT
TATGTGTTCTACAACGCCAGCAAATGGACCCTGAAACAGCTCTACCAAACCGCCACCAACAACCAGCAGATTTTGCTGGC
CAATGTGGAAGAGTACCTCAGCGGCTACAGCGGCAACGTCAAGGAGATTATCGGCAAGTTCAATCTCAAGGCCCAGGTGC
GCCATATGGCGGCCAAGGACGTGCTGCTGGATGTGCTGGAGAAGTTTACTTCCCCTTACATCAACCTCACCCACGAGGAA
GCCCAAGACCCGGAGGGTAACCGCCTGCCCGCCCTCAGCAACCTGGGGATGGGCTATGTGTTCGAGGAGCTGATCCGCAG
GTTCAACGAAGAGAACAACGAAGAGGCCGGCGAGCACTTCACCCCCCGCGAGGTGATTGAGCTGATGACCCACCTGGTCT
TCGATCCGGTCAAGGACAAGCTGCCGCCGGTGATGACCATCTACGATCCGGCCTGCGGCAGCGGCGGCATGCTCACCGAG
TCCCAAAACTTCATCAAGGATGAAGAGGGCGCCATCCGCGCCAGCGGCGATGTGTATCTCTACGGCAAGGAGATCAACGA
CGAGACCTACGCCATCTGCAAGTCGGACATGATGATCAAGGGCAACAACCCGGCCAACATCCGGGTGGGCTCCACTTTAT
CCACGGACGAATTCGCCGGCAACCGGTTCGACTTTATGCTCTCCAATCCCCCCTATGGCAAAAGCTGGGCCGGCGAACAG
AAATATATCAAGGACGGCGGCGAGGTCATCGACCCCCGCTTCAAGGTGCAGCTCAAGGATTATTGGGGCCATGTGGAAAC
CGTCGATGCCGCCCCCCGTTCCAGCGACGGCCAACTGCTGTTCCTGATGGAGATGATCAGCAAGATGAAAGCCCCCCAGG
CAGGAGGCCTGGGTTCCCGCATTGCCTCGGTCCACAACGGCTCCAGCCTGTTCACCGGCGACGCCGGCAGCGGCGAGAGC
AACATCCGCCGCCATATCATCGAGAACGACCTGTTGGAAGCCATCATCCAGTTGCCCAACAACCTGTTCTACAACACCGG
CATCACCACCTATATTTGGCTGCTCAGCAACCACAAGCCGGAGCACCGCCGGGGCAAGGCGCAGTTGATCGACGCCAGCC
GGCTCTACCGCAAGTTGCGCAAGAACCTGGGCAACAAGAACTGCGAGTTCGCCCCGGAACATATCCGCGAAATCACTCAA
ACCTATCTGGAATTGGCCAGCATCGACCGCCCGGCGGGGGCCGAGGGCATCGCCGCCCAGGTGTTCGACAATCGCGATTT
CGGCTACTACAAGGTCGCCATCGAACGCCCGGACCGGCGCAAGGCCCAATTCAGTACCGAACGCATTGAAACCCTGCGCT
TCGACAAGGCCCTAGGAGAGCCCATGGCCTGGATCTATGGACAATGGGGGGACAGGGTTTATGAAAAAGGTACCCTGGCC
GAGCACGAAAAGGCCATTCTCGCCTGGTGCGAAGAACAGGCGCTGAATCTCAACGCCAAGCAGCGCAAGAAACTGCTGAA
CCTGGAGACCTGGCGGAAGCACCATACCCTGGTTCAGATGGCCGAGCATTTGATGGCAGTCATCGGCACCGACGAGTTCA
ACGACTTTAACCGCTTCAAAACGCGAGTAGACAAGGCGCTGAAGGCCCTGGCCAAGGAAACCGGCGTCAAACTGGGCGTC
AGCGATAAGAACCAGTTGCTCAACGCCGTTAGCAAGTATGACGAAAACGCCGAGAAAGTCATCAAGAAGGTGGAGAAGTT
CAGCCAGGATCAACTACGGACTTTGCTGCAACGGCTGGGCTGCGAGGAAAGCGAGCTAGCCGATTTTGGCTACTATGCAA
CTGAAAAGCCCGACGAATACCTCACCTATGAAAGCAGTTCGGATCTGCGCGATAGCGAAACCATCCCCCTGAAGGACGAT
ATTCACCAGTACTTCAAAGCCGAAGTTAAACCCCATGTGAGTGAAGCCTGGATCAATATGGATTCGGTGAAAATCGGTTA
CGAGATCAGCTTCAATAAATATTTTTACCGCCACCAGCCCCTGCGCAGTATGGAAGAGGTAGCCAGGGAGATTATCGCCC
TGGAGCAGCAGGCCGAGGGGTTGATTGCCGATATTTTGGGCATTGATGTGGAAGAGGTTTCGGGGGTGGAGGGTGAGTGA

Protein sequence :
MNHAFHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDALLEPTKAAVLEEVRFQRKEMKLTELEDSALQAASG
YVFYNASKWTLKQLYQTATNNQQILLANVEEYLSGYSGNVKEIIGKFNLKAQVRHMAAKDVLLDVLEKFTSPYINLTHEE
AQDPEGNRLPALSNLGMGYVFEELIRRFNEENNEEAGEHFTPREVIELMTHLVFDPVKDKLPPVMTIYDPACGSGGMLTE
SQNFIKDEEGAIRASGDVYLYGKEINDETYAICKSDMMIKGNNPANIRVGSTLSTDEFAGNRFDFMLSNPPYGKSWAGEQ
KYIKDGGEVIDPRFKVQLKDYWGHVETVDAAPRSSDGQLLFLMEMISKMKAPQAGGLGSRIASVHNGSSLFTGDAGSGES
NIRRHIIENDLLEAIIQLPNNLFYNTGITTYIWLLSNHKPEHRRGKAQLIDASRLYRKLRKNLGNKNCEFAPEHIREITQ
TYLELASIDRPAGAEGIAAQVFDNRDFGYYKVAIERPDRRKAQFSTERIETLRFDKALGEPMAWIYGQWGDRVYEKGTLA
EHEKAILAWCEEQALNLNAKQRKKLLNLETWRKHHTLVQMAEHLMAVIGTDEFNDFNRFKTRVDKALKALAKETGVKLGV
SDKNQLLNAVSKYDENAEKVIKKVEKFSQDQLRTLLQRLGCEESELADFGYYATEKPDEYLTYESSSDLRDSETIPLKDD
IHQYFKAEVKPHVSEAWINMDSVKIGYEISFNKYFYRHQPLRSMEEVAREIIALEQQAEGLIADILGIDVEEVSGVEGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nhal_0751 YP_003526318.1 N-6 DNA methylase VFG1102 Protein 0.0 71