Gene Information

Name : Nhal_0551 (Nhal_0551)
Accession : YP_003526122.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 567086 - 568495 bp
Length : 1410 bp
Strand : +
Note : TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: noc:Noc_2652 glutamine synthetase type I

DNA sequence : 
ATGGCTGTTGATGATGTGTTGAAAACCATCAAGGAGGAGGAGATAAAATTTGTTGATTTCCGTTTTACGGATAGCCGAGG
GAAAGAACAACATCTTTCCATGCCTGCCTACCGCTTGGATGAGGAGGCCTTCAGGGAGGGCAAGATGTTTGATGGTTCTT
CCATTGCGGGTTGGAAGGCGATTCAAGAATCGGACATGATTCTGATGCCCGATCCAGAGACGGCAGTGCTCGATCCTTTC
ATGGAGGAGAAGACCTTGGTGCTCCGCTGCGACATTGTGGAGCCAACGACCCTCCAGGGCTATGAGCGGGATCCGCGGTC
TGTTGCAAAGCGTGCCGAAGCCTATTTGAAGTCCACGGGTATTGCCGATACGGCTTATTTTGGCCCAGAGCCTGAATTTT
TCGTGTTGGATGATGTGCGTTGGGGGACGGATATCTCCGGAGCTTTCTATAAGATTGATGCTGAAGAGTCCCATTGGAAT
TCTGAGCGGGTCTATGATAGAGGCAACATTGGACATCGGCCCACCATCAAGGGGGGGTATTTCCCCGTGCCTCCGGTTGA
TTCCCTCCAGGATCTTCGTTCCACCATGTGCCTGATCATGGAGCAAATGGGATTGCCAGTTGAGGTGCATCATCACGAAG
TGGCTACGGCAGGGCAGTGCGAGATTGGGACCCAATTCAATACCCTGGTGCGGCGAGCCGATGAACTCCAGATTCTTAAA
TATGTGGTGCTCAATGTTGCCCACTCTTTTGGCAAAACCGCTACCTTTATGCCTAAGCCCTTAGTAGGGGATAATGGCAG
TGGCATGCATACCCATCAGTCCCTTGCCAAAGAGGGGCAAAATATTTTCGCTGGCGATAAGTATGGGGGGCTATCCGAGA
CTGCCCTGTACTATATTGGGGGTATTATTAAACATGCCCGGGCGCTTAATGCTTTTACCAATGCGTCGACTAATTCCTAT
AAGCGCCTAGTACCGGGTTTCGAAGCGCCGGTATTGTTGGCTTATTCTGCCCGGAATCGCTCTGCGTCGATTCGGGTGCC
TTATGTGACCAGCCCTAAGGCACGGCGGATAGAGGTCCGGTTTCCCGATTCAACGGCTAACCCCTATTTTGCCTTTACCG
CAATGCTAATGGCCGGGCTTGATGGTATTCAAAATCAGATTCATCCTGGTGATGCCATGGATAAGAATCTTTATGACTTA
CCCCCCGAGGAGATGAAAGAGATTCCGACGGTTTGTTTTTCTCTTGAACAGGCCCTGGAGGCCTTGGATCGGGATCGGGA
TTTTCTCAAGGGAGGAGGGGTATTCACTGATGATGCCATTGATGCTTATATTGCGCTAAAGATGGACGATGTTACCCGCT
TGCGGATGACCACTCATCCCATCGAGTTTGATATGTATTACAGCCTTTAA

Protein sequence : 
MAVDDVLKTIKEEEIKFVDFRFTDSRGKEQHLSMPAYRLDEEAFREGKMFDGSSIAGWKAIQESDMILMPDPETAVLDPF
MEEKTLVLRCDIVEPTTLQGYERDPRSVAKRAEAYLKSTGIADTAYFGPEPEFFVLDDVRWGTDISGAFYKIDAEESHWN
SERVYDRGNIGHRPTIKGGYFPVPPVDSLQDLRSTMCLIMEQMGLPVEVHHHEVATAGQCEIGTQFNTLVRRADELQILK
YVVLNVAHSFGKTATFMPKPLVGDNGSGMHTHQSLAKEGQNIFAGDKYGGLSETALYYIGGIIKHARALNAFTNASTNSY
KRLVPGFEAPVLLAYSARNRSASIRVPYVTSPKARRIEVRFPDSTANPYFAFTAMLMAGLDGIQNQIHPGDAMDKNLYDL
PPEEMKEIPTVCFSLEQALEALDRDRDFLKGGGVFTDDAIDAYIALKMDDVTRLRMTTHPIEFDMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-105 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nhal_0551 YP_003526122.1 glutamine synthetase VFG1399 Protein 2e-108 50