Gene Information

Name : Nhal_3936 (Nhal_3936)
Accession : YP_003529333.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 4050246 - 4051178 bp
Length : 933 bp
Strand : -
Note : KEGG: noc:Noc_0502 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase

DNA sequence : 
ATGAGTGCAAAGACTTGTCTTCGTATTGCCACACGTAAGAGTCTCCTTGCTTTGTGGCAAGCTGAATATGTTGCTGATAC
ATTGCGTCATCACCACCCTGGCTTGAGTGTAGAATTGGTTCGAATGAGCACCCAGGGCGATAAAATCTTGGATACTCCCC
TGGCCAAGGTAGGTGGTAAGGGATTGTTTGTTAAGGAATTGGAACAAGGTCTGCTTAGCGGAGAGGCCGATATTGCCGTT
CATTCCATGAAAGATGTACCAGTGGTTTTGCCGGAAGACCTCCACATCTCGGTAATTTGTGAGCGAGAGGATCCCAGGGA
TGCTTTTGTCTCCAACCACTGGCAGCAATTGGATAGTCTTCCGGAAGGTGCGCGCGTGGGAACTTCGAGCCTACGCCGAC
AAAGTCAAGTACGCGAACGTCGCCCAGACTTCCATGTTTTGGATCTGCGCGGTAATGTTAATACCCGCTTAGCCAAATTA
GACAACAATGAATTTGATGGCATTGTTTTGGCGGCTTCGGGTTTAAAACGTTTAGGGCTGACTGACCGAATAACAGAATT
GCTGGCCCCTGAGGTCAGTCTTCCTGCTATCGGCCAGGGGGCTATTGGCATTGAGTGCCGAAAGGGCGATACCGCTACGG
AGGAGCTATTAAAAGTGCTTGAACATACCCCAACGCGGACTACCATTCGTGCTGAACGGGCGTTAAATGAGCGGCTTGCG
GGTGGCTGCCAAGTTCCCATTGCTGCCTATGCTGAACTTGATGGTGAGCGGCTGCGATTACGTGCTCTGGTGGGACAACC
GGATGGGGGTAAAGTCATTCGAGGTGAAATGTGGGGAACGCCTGAGGAAGCAGAGGTGTTAGGGGTATCCCTGGGCGAGG
ATTTGCTGCGGCGGGGGGCGGATAAGATCCTGGCGGAGGTCTACGGTGACTGA

Protein sequence : 
MSAKTCLRIATRKSLLALWQAEYVADTLRHHHPGLSVELVRMSTQGDKILDTPLAKVGGKGLFVKELEQGLLSGEADIAV
HSMKDVPVVLPEDLHISVICEREDPRDAFVSNHWQQLDSLPEGARVGTSSLRRQSQVRERRPDFHVLDLRGNVNTRLAKL
DNNEFDGIVLAASGLKRLGLTDRITELLAPEVSLPAIGQGAIGIECRKGDTATEELLKVLEHTPTRTTIRAERALNERLA
GGCQVPIAAYAELDGERLRLRALVGQPDGGKVIRGEMWGTPEEAEVLGVSLGEDLLRRGADKILAEVYGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 8e-83 58
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 8e-83 58