Gene Information

Name : Nhal_3825 (Nhal_3825)
Accession : YP_003529227.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3944676 - 3945146 bp
Length : 471 bp
Strand : +
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: noc:Noc_3023 single-strand binding protein

DNA sequence :
GTGGCATCAAGAGGCGTTAACAAAGTCATTCTGATAGGTAACCTGGGACGGGATCCGGAAGTCCGCTATACCGCCAGTGG
CGGGGCCATCGCCAATATCACCCTGGCCACCTCGGAGACCTGGAAAGACAAAACCACCGGCGAGCAACAGGAACGCACCG
AATGGCACCGGGTAGTGTTCTTCGGCCGCCTGGGGGAAATTGCCGGCGAATACCTGAAAAAAGGCTCCAAGATCTACGTG
GAAGGCCGCCTCCAAACCCGCAAGTGGCAAGGCCAGGACGGCCAGGACCGCTATACCACCGAGATTGTCGCCAACGAGAT
GCAAATGCTGGACCGGGCCACAGGCGGCAGCGCCCCTTATAACAACGACATGAACCAAGGCTCGGCCCCAGGCCCCTCAA
GTCCTCCCTCCCGGCCTTCACCTCCCCCGTCCTCAAGCGATGATGATTTTGAGGATGACATACCGTTCTGA

Protein sequence :
MASRGVNKVILIGNLGRDPEVRYTASGGAIANITLATSETWKDKTTGEQQERTEWHRVVFFGRLGEIAGEYLKKGSKIYV
EGRLQTRKWQGQDGQDRYTTEIVANEMQMLDRATGGSAPYNNDMNQGSAPGPSSPPSRPSPPPSSSDDDFEDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 3e-33 53
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 5e-36 51
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 5e-36 51
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 4e-36 51