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Name : Nhal_3577 (Nhal_3577) Accession : YP_003528987.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3679215 - 3680504 bp Length : 1290 bp Strand : - Note : KEGG: noc:Noc_1036 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTTGATCCGAAATTACTTAGAAATGCCCTAGCAGAGACTGCCCGCCAATTAGCGCGGCGGGGATTTGAGCTGGATGT GACCGCTTTTGCCGCGCTAGAAGCCGAGCGCAAAGAGGTGCAGGTCCGCACCCAAGAGCTTCAGGCCGAACGAAACGCCC GCTCCAAAGCCATCGGTAAAGCCAAGGCGCAAGGGGAGGATGCTGCTCCCTTGCTGGTGGAGGTGGCCGAATTGGGGGAT CGGCTCAAGGCTGCTGAGGCTCGTTTGGGGGAGATCCAGAGTCAAATCGATGAGATTCTGATGGGAATTCCCAACCTGCC TGATGCCAGCACGCCGGAGGGTCGAGACGAGAGGGACAATGTGGAGGTGCGGCGTTGGGGGGAGCCGCCTGCCTTAGGTT TTGCTCCCAAAGATCATGTGGACTTGGGGGGGCCGCTGGGGATGGATTTTGAAACCGCGGCAAAACTGAGCGGCGCTCGT TTTGTAACTCTCTCAGGCCTCTTAGCCCGTTTGCACCGGGCGCTTATCCAGTTTATGCTGGATGTGCACACCAGCGAGCA CGGCTATACTGAGGTTTACGTCCCCTATCTGGTGAATCGCCAATCTTTGGAGGGGACGGGGCAGTTGCCCAAGTTTGAGG AGGACCTATTTGCTATCCGTGATACCGGCTATTACCTCATTCCCACTGCTGAAGTTCCGGTAACCAATCTCGTCCGGGCG GAAATTTTGCCTGCCGAGCGCCTGCCCCTCAAGTATGTGGCCCATACCCCCTGCTTTCGTAGCGAGGCTGGATCCTATGG TAAGGATACCCGGGGGATGATCCGCCAGCATCAATTTGAGAAGGTAGAGTTGGTGCAGATTGTGCCGCCAAAAGACTCTC CCCAGGCCCATGAAAACCTAACCGGCCATGCAGAGGTCATTCTGCAGCGGCTAGGCTTACCCTATCGGGTCATGAATCTC TGCGCAGGAGATCTCGGTTTTGCCAGCAGTAAAACCTATGACTTGGAGGTATGGTTGCCAGGACAGCAGGCCTATCGGGA AATCTCCTCTTGCAGCAATTTTTTGGATTTTCAGGCGCGTCGGCTCCAGGCCCGTTGGCGCGATCCGGAAACCCAAAAAC CAGCATGGCTGCATACTCTTAATGGTTCCGGGCTAGCGGTGGGTCGGGCTTTGGTCGCAGTCATGGAGAATTATCAGCAG GCCGATGGCAGCATCCGTGTACCGGAAGTATTGCACCCTTATATGGGCGGCGTTTCGGTTATCCAGCCCCCCTCAGAAGC AACCCGATGA Protein sequence : MLDPKLLRNALAETARQLARRGFELDVTAFAALEAERKEVQVRTQELQAERNARSKAIGKAKAQGEDAAPLLVEVAELGD RLKAAEARLGEIQSQIDEILMGIPNLPDASTPEGRDERDNVEVRRWGEPPALGFAPKDHVDLGGPLGMDFETAAKLSGAR FVTLSGLLARLHRALIQFMLDVHTSEHGYTEVYVPYLVNRQSLEGTGQLPKFEEDLFAIRDTGYYLIPTAEVPVTNLVRA EILPAERLPLKYVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQIVPPKDSPQAHENLTGHAEVILQRLGLPYRVMNL CAGDLGFASSKTYDLEVWLPGQQAYREISSCSNFLDFQARRLQARWRDPETQKPAWLHTLNGSGLAVGRALVAVMENYQQ ADGSIRVPEVLHPYMGGVSVIQPPSEATR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-102 | 53 |
