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Name : Nhal_3526 (Nhal_3526) Accession : YP_003528937.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3626244 - 3627644 bp Length : 1401 bp Strand : - Note : KEGG: noc:Noc_0223 DnaB helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; SMART: ATPase AAA DNA sequence : ATGCCGGGACTCGCCTACCAAGAGCAGAAAGACGAACTGGTCGATGGACTTAAGGTTCCTCCCCATTCCATTGAGGCCGA GCAATCGGTATTAGGCGGATTATTATTAGATAATCAGGCCTGGGATCAGATCGCTGATATTCTTAGCGTGGAGGATTTCT ATCGCCAGGACCACCGCCTCTTATTCCACTCTATGGGTGAGTTGATTGAACGCTCACAACCCTGTGATGTGGTGACCCTC TCCGAATGGTTAAAGGACAAGCAAGTATTGGAGGAAGTGGGCGGCTTAGCCTATCTCACGAGTTTAGCCCGCAATACGCC GACGGCGGCCAACATCAAGGCCTATGGGGAGGTGGTCCGGGAGCGTTCGGTATTGCGCCAGCTTATCCGGGTGGGCACTG ATATTGCCGGTAATGCCTATCAGCCGGGGGGGCGGAATAGTGGGGAGCTGCTCGACGAAGCCGAAAAGCGGGTATTCGAA ATTGCCGAACAAGGTGCCCGCGGCCGGCAAGGTTTCGTCAACATAAAGAACCTGCTAGGTAAGGTGGTGGATCGGATCGA CCACCTGTTCGAACAGGATAGTCCGATTACTGGGCTTCCCTCGGGCTTTACGGATTTTGATGCCCTAACTTCTGGTCTCC AGCCGGCGGATTTAATTATTGCCGCCGGCAGGCCCTCCATGGGTAAGACTACCTTCGCCATGAATATTGCGGAACATGTG GCCATTAAGCATCGGGTGCCCGTGGCCGTGTTTAGCATGGAAATGCCTGGCGAACAATTGGCCATGCGGATGATGTCTTC TTTAGGGTATATTGATCAGCACCGGATACGGACGGGCCGCCTAGAAGACGATGATTGGCCGCGCTTGACCTCGGCGGTTA GTTTGCTGACCGAGGCGCCGCTTTTTATCGACGATACCCCGGCCCTTTCCCCTACTGAGCTACGGGCGCGGGCACGGCGG TTGATGCGGGAACAGGATGGCCTTGGCCTGATCCTCATTGATTACTTACAGCTGATGCAGGTGCCCGGTCACCGGGAGAA TCGGGCCACTGAGATCTCCGAGATTTCACGTAATCTCAAGGCCGTGGCCAAGGAACTCAATGTCCCGGTGTTAGCCATCT CTCAGCTTAACCGCAGCCTGGAACAACGGCCTAACAAACGGCCAGTGATGTCGGATTTGCGGGAATCCGGTGCCATCGAG CAAGATGCCGACCTTATCGTGTTTATCTATCGCGATGAGGTCTATAATGAGGATAGCCCTGATCGGGGAACGGCTGAGAT TATCATTGGTAAGCAACGTAATGGTCCTATTGGAACCGTGCGTCTCACCTTCCGCGGCCAGTATACCCGCTTTGAAAATT ATGTTCAGGACGTCTACGGCGCAGGGGGCGGGACCGCTTAG Protein sequence : MPGLAYQEQKDELVDGLKVPPHSIEAEQSVLGGLLLDNQAWDQIADILSVEDFYRQDHRLLFHSMGELIERSQPCDVVTL SEWLKDKQVLEEVGGLAYLTSLARNTPTAANIKAYGEVVRERSVLRQLIRVGTDIAGNAYQPGGRNSGELLDEAEKRVFE IAEQGARGRQGFVNIKNLLGKVVDRIDHLFEQDSPITGLPSGFTDFDALTSGLQPADLIIAAGRPSMGKTTFAMNIAEHV AIKHRVPVAVFSMEMPGEQLAMRMMSSLGYIDQHRIRTGRLEDDDWPRLTSAVSLLTEAPLFIDDTPALSPTELRARARR LMREQDGLGLILIDYLQLMQVPGHRENRATEISEISRNLKAVAKELNVPVLAISQLNRSLEQRPNKRPVMSDLRESGAIE QDADLIVFIYRDEVYNEDSPDRGTAEIIIGKQRNGPIGTVRLTFRGQYTRFENYVQDVYGAGGGTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 5e-100 | 53 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-96 | 51 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 5e-97 | 51 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-93 | 51 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-91 | 49 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-90 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-84 | 47 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-84 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 9e-76 | 43 |
