Gene Information

Name : Nhal_3414 (Nhal_3414)
Accession : YP_003528830.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 3515566 - 3516339 bp
Length : 774 bp
Strand : +
Note : TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; KEGG: noc:Noc_2840 3-deoxy-D-manno-octulosonate cytidylyltransferase

DNA sequence : 
ATGCCCTATAAAGTCATTATCCCCGCCCGCTATGGCTCTAGCCGCCTGCCTGGTAAACCCCTGCTCGATCTGGCCGGTAA
ACCCATGCTGCTCCATGTCGTAGAAAAAGCCCAAGAAAGTGGCGCGGAGGAAATTTTGGTGGCTACCGACGATAGGCGCA
TAGAGGCCATCGTCAAAGGCTGGGGTATCCAGGTCTGTATGACTTCAACCGAGCATAGCTCTGGGACTGAGCGATTAGCC
GAGGTGGTGGCTCAACAGGATTACTCGAACCAGACCCTTATTGTCAATGTCCAGGGTGATGAACCCCTTTTACCCCCCTC
CCTAATCGCCCAGGCGGCAAAAGATCTAGAACTTCACCCCGAGGCAGATGTGGCCACCTTAAGCGTGAATATCGCCAACC
GCGAGGAGTTATTTAATCCCAACATTGTCAAGGTGGTTCGGGATGCGCAAGGCTATGCTCTTTATTTCAGCCGAGCGCCC
ATTCCCTGGGCTAGAGAAGATTTTGCCGCTGAGAACAGAATCTGGCCGACTTCCTGGCCCTATTATCGCCATCTCGGCCT
TTACACCTATCGGGCAGGCTTCTTGCGATCCTATCCTCAACTCCCTCCCTGCCCTCTGGAACAAGCCGAGCGCCTAGAGC
AATTGCGGGTCTTATACCATGGGGGCCGAATCCATGTGGCTGTTGCCGATGTGATTCCCCCTCCAGGGGTGGATACCCAG
GCTGATCTGGAACAAGCTAGGCAATTGCTAGCCCAGAAAGACCATCCCGCCTAA

Protein sequence : 
MPYKVIIPARYGSSRLPGKPLLDLAGKPMLLHVVEKAQESGAEEILVATDDRRIEAIVKGWGIQVCMTSTEHSSGTERLA
EVVAQQDYSNQTLIVNVQGDEPLLPPSLIAQAAKDLELHPEADVATLSVNIANREELFNPNIVKVVRDAQGYALYFSRAP
IPWAREDFAAENRIWPTSWPYYRHLGLYTYRAGFLRSYPQLPPCPLEQAERLEQLRVLYHGGRIHVAVADVIPPPGVDTQ
ADLEQARQLLAQKDHPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-39 45
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 4e-39 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-39 45