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Name : Nhal_0339 (Nhal_0339) Accession : YP_003525922.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 333425 - 334441 bp Length : 1017 bp Strand : - Note : KEGG: noc:Noc_2788 sugar phosphate isomerase involved in capsule formation, KpsF/GutQ; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein DNA sequence : ATGGTCAGCAACCCATTGAATTCACCCCTATCCAGCTACAACGAGGATCTGGATAAACGGCTGGCCCAGCTAGGAGCAGC TGTTATCGAAACTGAAGCCAGTGCTGTAGCTGCATTGAGAACTCGAATTAACGGGAATTTTGCCGCTGCCTGCAAATACA TGCTCGCCTGCACGGCCCGTATTGTGGTGCTAGGAATGGGCAAATCCGGCCATATTGGCGGAAAAATCGCGGCAACCCTA GCCAGCACAGGTACTCCTGCTTTTTTTGTCCACCCAGGTGAAGCCAGCCACGGCGATCTAGGGATGATTACCGAAAAGGA TGTGGTGCTGGCGCTTTCCAATTCTGGAGAAACTGAAGAAATCTGTACTATTCTTCCCCTGATCAAACGTCTAGGCGTTC CCTTGATTGCGCTGACAGGACAGCCCCAATCAACCCTTGGAAAAGCTGCCGATGTTCACATCGATATTAGTGTCGAGAAA GAAGCTTGTCCCCTGGGGTTGGCCCCCACCGCAAGCAGTACGGCAACGCTAGCCATGGGTGATGCCCTTGCCATTGCCTT GCTAGAGGCACGGGGGTTCACAGCGGAGGATTTTGCCCGCTCTCATCCCGGCGGCCGCCTGGGAAGGCGACTCTTGCTTC GGATTAGCGACATCATGCATCGGGGGGAGGCCATCCCCGCGGTCACGGAGGATGTGCTCTTGAGCAATGCCTTGCTGGAA ATGACCCGTAAAGGGCTAGGAATGACAGCCGTCGTTGATGTTCAAAACCAGGTCGTCGGCATATTTACCGACGGAGACTT GCGCCGGGCCCTCGACCGGGGGATCGATGTTCATGCCACCCCAATTGCCGCCATCATGACCACCCATTGTAAAACCCTCG GTCCTGAACTCCTTGCCGCTGAAGCCTTGCAAATGATGCAGCGTCATCGTATTAATGCGCTCCTTGTGGTAGATCACGAG CAACACTTAATTGGCGCTTTAAATATGCATGACCTGCTTCGGGCAGGTGTCTTGTAG Protein sequence : MVSNPLNSPLSSYNEDLDKRLAQLGAAVIETEASAVAALRTRINGNFAAACKYMLACTARIVVLGMGKSGHIGGKIAATL ASTGTPAFFVHPGEASHGDLGMITEKDVVLALSNSGETEEICTILPLIKRLGVPLIALTGQPQSTLGKAADVHIDISVEK EACPLGLAPTASSTATLAMGDALAIALLEARGFTAEDFARSHPGGRLGRRLLLRISDIMHRGEAIPAVTEDVLLSNALLE MTRKGLGMTAVVDVQNQVVGIFTDGDLRRALDRGIDVHATPIAAIMTTHCKTLGPELLAAEALQMMQRHRINALLVVDHE QHLIGALNMHDLLRAGVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-44 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-44 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 9e-44 | 43 |
