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Name : Nhal_0252 (Nhal_0252) Accession : YP_003525840.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photo-lyase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : 4.1.99.3 Position : 261342 - 262775 bp Length : 1434 bp Strand : - Note : PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: tgr:Tgr7_1394 deoxyribodipyrimidine photo-lyase DNA sequence : ATGGCTCAGCCTACTGCTTTGGTCTGGTTCCGCCGCGACTTGCGATTAGGGGATAATCCGGCCTTGGCTGCGGCCTGCGC GCTAGGGGGGCAAGTGATCCCTGTCTATATTGATGCCCCGGAAGAAGAAGGTGCCTGGCCTCCCGGTGCCGCCAGCCGCT GGTGGCAACATCATAGTTTGGCAGCCCTTGACTCTGGGCTAAAAAAACGGAACTCCCGGCTCATCGTGCGGCAGGGTCCA AGCCACAAGGCCCTAGGCCAGCTTGCAGAAGAAACCAGCGCTACCCATATATTCTGGAACCGCCGCTATGAGCCTGCGGT CATCAAACGGGACCAGGCGATTAAACAGCAGCTCCGCGCCGCTGGCCTGACAGTTAAGAGCACCAATGCTCTGCTGCTAT TCGAACCTTGGGAAATTGCTAAAAACGACGGTATGCCTTATCGAATTTTCACCCCTTTTTGGAAAACCTGCCTAGAAAAA GGCATAGGCCGGTCTCCTTTCCCTCCACCGCAGCACTTACCCCCCGTAAACCGGCAACTACAAAGCGAGCCTCTATCCAC CCTCGGGCTGCTGCCGAAAATTCCTTGGGACCAGGAATTCTACACCCATTGGACTCCTGGGGAAGCAGGGGCCTGGCGAC AATGGGAATGCTTCTTGGAAGAGGCTTTAGGAAAATATCACCAGGAACGGGACCGGCCCGATTTACCAGGGACTTCCCGT CTCTCGCCCCATCTTCATTTTGGCGAGATTAGCCCACGTCAAATAGCGTTCCAGATCCAGATTCAAATGGACAGGCGCGC TGAACTTACTGCCGGCGGCCAAGCCTACCTCCGGCAACTTGGCTGGCGGGAATTTGCCTACCATTTGCTCTACCACTTCC CGGAAACACCGGAAAAACCCTTAAACGAAGGTTTTACCCATTTTCCCTGGGCCGAAGATTATGGTGAAGCCCTAACCGCC TGGCAACAAGGCAGAACAGGCATTCCCCTGGTGGATGCGGGGATGCGAGAGCTATGGCGAACCGGTTGGATGCATAACCG GGTGCGGATGATTGCCGCCTCCTTGCTGACCAAAAACTTGCGAATTCCGTGGCAAGAGGGGGAGCGTTGGTTCTGGGAGA CCCTGGTCGATGCCGACCTGGCCAGTAACACCCTAGGCTGGCAATGGGTGGCAGGATGTGGGGCCGATGCCGCCCCCTAC TTCCGTGTTTTCAACCCCGTGCTCCAGGGTAAAAAGTTTGATCCTGAAGGGAAATACGTACAACAATGGATTCCTGAACT CCGGAAAATCTCCAAACAACACATCCATGAACCTTGGAAAGAGGCGAGGCAACCCCTCTCAACCCCAGGGAGCGTGGGGG GTCAGTCGGGAGCGTGGGGAGTCAGGTCTCGCAATGTGCTTTTTCCATATGATAATCCTAAAATCCACAGATAA Protein sequence : MAQPTALVWFRRDLRLGDNPALAAACALGGQVIPVYIDAPEEEGAWPPGAASRWWQHHSLAALDSGLKKRNSRLIVRQGP SHKALGQLAEETSATHIFWNRRYEPAVIKRDQAIKQQLRAAGLTVKSTNALLLFEPWEIAKNDGMPYRIFTPFWKTCLEK GIGRSPFPPPQHLPPVNRQLQSEPLSTLGLLPKIPWDQEFYTHWTPGEAGAWRQWECFLEEALGKYHQERDRPDLPGTSR LSPHLHFGEISPRQIAFQIQIQMDRRAELTAGGQAYLRQLGWREFAYHLLYHFPETPEKPLNEGFTHFPWAEDYGEALTA WQQGRTGIPLVDAGMRELWRTGWMHNRVRMIAASLLTKNLRIPWQEGERWFWETLVDADLASNTLGWQWVAGCGADAAPY FRVFNPVLQGKKFDPEGKYVQQWIPELRKISKQHIHEPWKEARQPLSTPGSVGGQSGAWGVRSRNVLFPYDNPKIHR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 2e-73 | 45 |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 1e-73 | 44 |
