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Name : Nhal_2437 (Nhal_2437) Accession : YP_003527912.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2505198 - 2506700 bp Length : 1503 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: tgr:Tgr7_1462 lysyl-tRNA synthetase DNA sequence : ATGGTTGAACAGGAAGAGAGCGAGCTGATTGCCCAGCGGCGGGCAAAATTGGCTGAACTTCGTGCGCGGGAGAATCCCTT TCCCAATAACTTTCGGCGCAATGTGATGGCCGGTGAGCTGCAGGCGGAATATCACCATAGAAGTGCAGAGGAACTGGAGA AACGGCCCTTGCGGGTCAAAGTGGCTGGCCGCATGATGACCCGGCGGATTATGGGGAAGGCAAGCTTTGCCCATATTCAG GACATGTCGGGGCGAATCCAGCTTTATATCCGCCGCGACCAGCTACCGGAAGAAGGTTATCGGGAATTCAAGCGTTGGGA TATTGGGGATATTGTAGGGGCCGAAGGTGTGCTCATGAAGACCAACAGCGGTGAGCTTTCCGTCCGGGTCGATGGGTTGC GGCTGTTGACCAAATCCTTACGTCCTTTGCCTGAGAAATTTCATGGCTTGGCGGACCAAGAAACCCGCTATCGGCAGCGT TATCTCGATCTCATCATGAATGAGGTGACCCGAGAAACTTTTCGTCGGCGTAGTTATATTATCGATCGGATACGGCGTTA TTTAGGGGATAAGGGGTTTCTCGAAGTGGAAACGCCTATGATGCAGGCAATTCCCGGTGGCGCTGTGGCTCGGCCTTTTA TTACCTACCACAATACGCTGGATATGGAGCTGTTTTTACGGATCGCTCCAGAGCTTTATCTTAAGCGCCTCGTAGTGGGG GGGTTTGAAAAGGTGTTCGAGATCAATCGTAATTTTCGGAACGAAGGGCTTTCCGCCCGCCATAATCCGGAGTTTACGAT GCTGGAGTTTTATCAGGCCTACGCCACCTATGAAGATCTGATGGATCTCACCGAGGCCATGATGAGGGACTTGGCGCAGA CGGTGCTCGGTTCGACCGAAATTACCTATCAGGGCGAAACTTATGATTTTGGCAGCCCTTTTACCCGGATGAGTCTCAAA GAGTCCATTCTCTCGTTCAATCCCGATATCTTCCCCGCGGATTTGGAAACCCTTCCCGCTGCCCGTCGTGTAGCCGAGCA TCTCGACATTCCCCTTCGGGAAAGTTATGGCCTGGGCAAGATACAGCTTGAGATCTTTGAGAAGACTGTGGAGTCTAGAC TTAAAAACCCCACTTTTATCACTGCTTATCCTACAGAGGTCTCGCCTTTGGCGCGGCGCAATGAAACGGATCCCTTGGTA GCCGATCGGTTCGAATTTTTTGTTGGCGGGTGGGAAATCGCCAATGGTTTTTCTGAGCTGAATGATGCCGAAGACCAGGC CGAACGTTTCCGGGCCCAATTACAAGACCGGGAAGCGGGTGATCAGGAGGCAATGCATTTTGATATGGACTATATTCAGG CCTTGGAATATGGCATGCCGCCCACGGCGGGAGAGGGTATTGGTATCGACCGCCTGGTGATGTTATTGACCGACTCCCCT TCTATCCGTGATGTCTTGTTATTCCCCCATATGCGGCCGCGGGAGAAGCTAGCAAAATCCTAG Protein sequence : MVEQEESELIAQRRAKLAELRARENPFPNNFRRNVMAGELQAEYHHRSAEELEKRPLRVKVAGRMMTRRIMGKASFAHIQ DMSGRIQLYIRRDQLPEEGYREFKRWDIGDIVGAEGVLMKTNSGELSVRVDGLRLLTKSLRPLPEKFHGLADQETRYRQR YLDLIMNEVTRETFRRRSYIIDRIRRYLGDKGFLEVETPMMQAIPGGAVARPFITYHNTLDMELFLRIAPELYLKRLVVG GFEKVFEINRNFRNEGLSARHNPEFTMLEFYQAYATYEDLMDLTEAMMRDLAQTVLGSTEITYQGETYDFGSPFTRMSLK ESILSFNPDIFPADLETLPAARRVAEHLDIPLRESYGLGKIQLEIFEKTVESRLKNPTFITAYPTEVSPLARRNETDPLV ADRFEFFVGGWEIANGFSELNDAEDQAERFRAQLQDREAGDQEAMHFDMDYIQALEYGMPPTAGEGIGIDRLVMLLTDSP SIRDVLLFPHMRPREKLAKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-133 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-77 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nhal_2437 | YP_003527912.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-133 | 60 |
