Gene Information

Name : Nhal_0236 (Nhal_0236)
Accession : YP_003525826.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 247766 - 248767 bp
Length : 1002 bp
Strand : +
Note : PFAM: protein of unknown function DUF523; protein of unknown function DUF1722; KEGG: noc:Noc_0394 hypothetical protein

DNA sequence :
ATGTCTATGACCCCCGCCCCTCTCAAGGGAGAAACCCCGTCTCCCCAATCTCTTGGAATTCCCCGAATACGCATTGCGGT
GAGCAGTTGCCTCCTGGGGGAGAAGGTCCGTTTTGACGGGGGTCATAAGCGAGATACCTATGTGACCGAGGCCCTGACTG
CCTATTTTGATTTTGTTCCCGTTTGCCCGGAGGTGGCCATCGGGATGAGCATCCCCCGGGAGCCAATCCATATTGTTAAA
ACCGACCAGGGGCCGCGGGTAAGGGGCATACGGCATAGGGATCTGGATGTCACCGACAAGCTGCGCCAGTTTGGAGAAGC
CATGGCCGAAGAACTGGAGGATATCGACGGCTATATCTTGAAGAAAGACTCGCCAAGCTGCGGAATGGAGCGGGTTCGGG
TTCATGGCACTGGGGGCGCCCCTTCCCGGACAGGGGTAGGGATGTATGCCCAGGCTTTTATGAGGCGGCGACCCTGGCTG
CCGGTAGAGGAAGAGGGGCGTTTGAACGATCCGGTATTACGGGAGAACTTTTTTGAGCGGGTTTTTGTCCATTACCGCTG
GCGGCAGATGCAGGCGGAGGGAATGACGCCCGCGGCTTTGGTGGAATTTCACAGCCGGCATAAATTTGCGGTCATGGCCC
ATAGCCAAGCGGTTTACCGGCGTTTGGGGCGCTTGGTGGCAAAGGCGGGCAGCGAGCCCATTGAAACATTGGCGGCAGCC
TATGGGGCGGAATTGATGAGCGCCCTGAAAAAATGTGCCACCCGAAGGGGACATGCCAATGTGCTGATGCACCTGCTAGG
ATTTTTACGCACCCAGCTGGATAAAGAAGACCGGGCGGAACTCCTAGAGTCCATTGAAAATTACCGCCTGGGTCTGGTGC
CCTTAATTGTCCCCATCACTTTGCTCAAGCATCATTTCCGGCGCCACCCCAACCCCTATGTGAACAAGCAATATTATCTT
AATCCCCACCCTCCTGAATTAATGCTGCGGAATTTGATTTAA

Protein sequence :
MSMTPAPLKGETPSPQSLGIPRIRIAVSSCLLGEKVRFDGGHKRDTYVTEALTAYFDFVPVCPEVAIGMSIPREPIHIVK
TDQGPRVRGIRHRDLDVTDKLRQFGEAMAEELEDIDGYILKKDSPSCGMERVRVHGTGGAPSRTGVGMYAQAFMRRRPWL
PVEEEGRLNDPVLRENFFERVFVHYRWRQMQAEGMTPAALVEFHSRHKFAVMAHSQAVYRRLGRLVAKAGSEPIETLAAA
YGAELMSALKKCATRRGHANVLMHLLGFLRTQLDKEDRAELLESIENYRLGLVPLIVPITLLKHHFRRHPNPYVNKQYYL
NPHPPELMLRNLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-62 42
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 6e-63 42
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 8e-63 42
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-62 42
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-62 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nhal_0236 YP_003525826.1 hypothetical protein VFG0490 Protein 4e-63 42