|
Name : Nhal_2348 (Nhal_2348) Accession : YP_003527823.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Virulence Product : ATPase, FliI/YscN family Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 2422213 - 2423655 bp Length : 1443 bp Strand : + Note : KEGG: noc:Noc_2356 flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; SMART: AAA ATPase DNA sequence : GTGAGTGACACTGTTTCCACAACTCCCCTTCTGGGGGGCCGCTGGCGGCAAACCTTAGCCGAGTGCCGGGAGCGTTTGCT CCAAGATGAGGCTCCCCTGTTGAGGGTGGAGGGGCGCCTCATTCGAATGGTGGGGTTGACCCTGGAAGCCGTCGGGTGTC AATTGCCGGTAGGAGGACGTTGCCATATTTTAAGACCGGGGAAGCCGCCGGTGGAAGCTGAAGTGGTCGGTTTTGCCGGA GAGCGGCTTTTTTTGATGCCCACCGGTGATCCGAGAGGGTTGGTGCCCAATGCCCCGGTGATTCCCCTTCCCCATGGCGG TGGAGTGGCGGTAGGCGCGGGGCTGCTGGGCCGAGTTCTGGACGGTGGAGGGCGTCCTTTGGATGGCCTGGGTCCTTTGC GTACCCCCCATCATGTTTCCCTGGACGGTCAGCCGATCAATCCCTTAGCACGGCAACCGATTAGGGAACCCCTGGATGTG GGGGTAGCCGCAATCAACGGGTTGATTACCATCGGCCGCGGTCAGCGCATGGGGTTGTTTGCGGGCAGTGGGGTGGGTAA GAGCATATTACTGGGCATGATGACCCGCTACGCTAAGGCGGACGTCATCGTGGTGGGGCTGATTGGGGAGCGGGGTCGGG AGGTCCAAGAATTTATCGAAAGCACTCTGGGTCCGGAGGGGTTAGCGCGCTCGGTGGTGGTGGCAACCCCCGCAGATCAT TCTCCCTTGATGCGGCTCCATGGCGCCATGCTCGCCACCAGTATCGCCGAATATTTCCGGGATCAGGGCCGACAGGTGTT ATTGTTGATGGATTCCCTGACCCGTTTTGCCCATGCCCAGCGGGAATTGGCTTTGGCTATCGGTGAGCCGCCAGCCACTC GAGGTTATCCTCCGTCGGTATTTGCCAAGGTCCCCCAATTGGTGGAAAGGGCGGGCAACGGCCGCTCGGGCAGCGGCAGT ATTACCGCCTTTTATACCGTGCTCACGGAAGGGGATGATGCCAATGATCCGGTGGCTGATGCGGCGCGGGCCATCTTGGA TGGCCATATCGTGCTGTCCCGGCGGTTGGCGGAAGCGGGTCATTATCCTGCCATTGATATTGAAGCTTCAGTCAGCCGGG TGATGAGTCAAATCACCACGCCGGAGCACCGGCAGGCGGCCCAACAATTTAAGCAAATTTACTCCCTTTATCAGCAGAAT CGGGATCTTATCAGCGTGGGGGCTTATCGCCGCGGTGGCGATCCTCGCCTCGATGAGGCCATTGATAGGCAACCCCGGTT CCAAACATTTCTCCAGCAAGGTATGTTTCAATCGTTTTCCATTGACCAGAGCCTTAAAGGGCTTCAACAAGCATTAAGGG AACAACAACCCCCAAAGACGGCGGCACCCGTGACGAATGCTGCGGGCGTATTAAGGCATGAGGATCGGGGAGGCCGTGCA TGA Protein sequence : MSDTVSTTPLLGGRWRQTLAECRERLLQDEAPLLRVEGRLIRMVGLTLEAVGCQLPVGGRCHILRPGKPPVEAEVVGFAG ERLFLMPTGDPRGLVPNAPVIPLPHGGGVAVGAGLLGRVLDGGGRPLDGLGPLRTPHHVSLDGQPINPLARQPIREPLDV GVAAINGLITIGRGQRMGLFAGSGVGKSILLGMMTRYAKADVIVVGLIGERGREVQEFIESTLGPEGLARSVVVATPADH SPLMRLHGAMLATSIAEYFRDQGRQVLLLMDSLTRFAHAQRELALAIGEPPATRGYPPSVFAKVPQLVERAGNGRSGSGS ITAFYTVLTEGDDANDPVADAARAILDGHIVLSRRLAEAGHYPAIDIEASVSRVMSQITTPEHRQAAQQFKQIYSLYQQN RDLISVGAYRRGGDPRLDEAIDRQPRFQTFLQQGMFQSFSIDQSLKGLQQALREQQPPKTAAPVTNAAGVLRHEDRGGRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-79 | 52 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-79 | 52 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-78 | 52 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-78 | 52 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 4e-80 | 52 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-78 | 52 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-79 | 52 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 7e-80 | 52 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 8e-79 | 52 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 7e-80 | 49 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 9e-69 | 45 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 6e-62 | 44 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 7e-64 | 44 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 1e-64 | 44 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 8e-65 | 44 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 8e-63 | 44 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 3e-64 | 43 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 2e-64 | 43 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 1e-64 | 43 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-64 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nhal_2348 | YP_003527823.1 | ATPase, FliI/YscN family | VFG1254 | Protein | 5e-119 | 67 |
| Nhal_2348 | YP_003527823.1 | ATPase, FliI/YscN family | VFG2331 | Protein | 7e-107 | 64 |
| Nhal_2348 | YP_003527823.1 | ATPase, FliI/YscN family | VFG2499 | Protein | 3e-113 | 63 |
| Nhal_2348 | YP_003527823.1 | ATPase, FliI/YscN family | VFG0192 | Protein | 4e-78 | 49 |
| Nhal_2348 | YP_003527823.1 | ATPase, FliI/YscN family | VFG0390 | Protein | 3e-78 | 48 |
| Nhal_2348 | YP_003527823.1 | ATPase, FliI/YscN family | VFG0048 | Protein | 1e-79 | 47 |
| Nhal_2348 | YP_003527823.1 | ATPase, FliI/YscN family | VFG2144 | Protein | 2e-81 | 45 |
