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Name : Nhal_2318 (Nhal_2318) Accession : YP_003527793.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2389624 - 2392221 bp Length : 2598 bp Strand : + Note : KEGG: noc:Noc_2381 ATP-dependent Clp protease; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; ATPase AAA central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA DNA sequence : ATGCGACAGGACAAGTTAACCACCAAGTTTCAGGAGGCCCTGGCTGATGCCCAAAGCCTGGCTGTGGGGCAGGACCATCA ATTTCTGGAACCGCTGCATGTAATGTTTGCCCTGCTAGAACAGCAAGGCGGGACCGCAGCCCCCTTATTGATGCAGGCAG GAGTGAATGTCAACAATTTCCATGCCCAGCTCAGCGAGGCTCTGAAACGGCTTCCCCAAGTACAGGGCGTTCCGGGAGAG ATACATATCTCTCAAGATTTGATGCGGTTGCTCAATGTGACCGATAAGCTGGCCCAGCAGCGCCATGATCAATATATCTC CAGTGAATTATTCATGCTTGCCGCTGTGGAGGATAGGGGCCAGGTGGGCGAGTTGTTGCGTAAAAATGGCGCCACTAAGG CGAGTATAGAGGCGGCTATCAATACCATCCGTGGGGGGCGACAAGTGAATGAACCGGGGGCCGAGGACCAACGCCAGGCC CTAGAGCGCTATACCATCGATCTCACGGAGCGGGCCGAGCAGGGTAAATTAGATCCGGTCATTGGCCGTGATGATGAGAT ACGCCGCACTATTCAGGTGCTGCAACGCCGGACTAAAAATAATCCCGTGCTGATTGGTGAACCGGGGGTGGGTAAAACTG CCATTGTCGAGGGATTAGCCCAGCGTATTGTCAACAGCGAGGTCCCAGAAGGACTCAAGCATAGGCGTTTGCTTGCGCTG GATATGGGGGCCCTGATTGCCGGTGCCAAGTTCCGGGGCGAGTTTGAGGAGCGCCTTAAGGCGGTGCTCAAGGACATCAG CAAGGCAGAAGGGAATATTATTTTATTTATTGACGAACTCCATACAGTGGTGGGGGCGGGTAAGGCGGAAGGAGCCATGG ATGCCAGTAACATGCTCAAACCGGCCTTGGCTCGCGGTGAACTTCACTGCATTGGGGCAACGACCCTGGATGAGTATCGT CAATACATAGAAAAAGACGCGGCTTTGGAACGGCGTTTCCAAAAGGTGCTGGTGGATGAGCCAAGCTTAGAAGATACCAT TGCTATCCTGCGGGGCTTGAATGAGCGCTATGAAGTCCATCATGGGGTGGAGATCACCGATCCTGCCATTGTGGCGGCAG CCACTTTATCCCACCGTTATATTACCGATCGCAAACTTCCAGACAAGGCCATTGATCTCATCGACGAGGCTGCCAGCCGC ATTCGGATGGAGATCGATTCCAAGCCGGAGCCCATGGACCGGATGGAAAGACGCTTGGTTCAATTGAAAATTGAGCGGGA AGCTTTACGGAAGGAAACTGACGAAGCCTCTAAAAAGCGTCTGGAGACTTTGGAAACCGAGATTAACCATTTGGAAAAAG AATATGCCGATCTAGAAGAGATTTGGAAGGCGGAGAAAGCCGCCCTAAGCGGTGCCCAGGGGATCAAGGAAAAACTGGAA CAGGCTCGATTGGAGCTGGACTCCGCCCGCCGTGCCGGAGATTTAACTCGGATGTCGGAGTTACAGTATGGCCAGATCCC GGAACTCCAAAAACAGCTCGATGCGGCCACCGCGGCTGAACAGCAGGATTTTAAATTACTGCGCAACAAGGTGACTGAGG AAGAAATTGCCGAGGTGGTTTCCAAATGGACGGGAATTCCGGTTTCCAAAATGCTGGAAGGAGAGCGGGAGAAATTATTA AAAATGGAAGAGGCGTTGCATCGGCGAGTGGTGGGCCAGGAAGAAGCCATCGAAGTGGTAAGTAACGCGATTCGCCGTTC CCGGGCCGGGCTAGCTGATCCTAACCGGCCGAATGGTTCCTTCCTCTTTCTCGGGCCTACGGGGGTAGGAAAGACTGAGC TTTGTAAGGCCCTGGCGGCTTTCTTGTTTGATACGGAGGAAGCCATGGTTCGCATCGACATGTCCGAGTTTATGGAGAGG CACTCCGTGGCCCGGCTCATCGGGGCTCCTCCCGGTTATGTGGGGTTTGAAGAGGGGGGCTACCTCACCGAGGCGGTACG CCGCAAGCCCTATTCGGTCATCTTGCTCGACGAGGTGGAGAAGGCCCACCCGGATGTATTTAATATTTTGCTCCAAGTTT TGGATGATGGACGGCTGACAGATGGCCACGGTCGCACGGTAGATTTTCGCAATACAGTGGTGGTCATGACTTCTAACCTC GGTTCCCATGTGATTCAGGAAATGGCCGGGGAGGAACATTACCAGGAAATGAAAAATGCGGTAATGGAGATTGTCGGGCA GCATTTCCGTCCGGAATTTATTAACCGAGTGGACGATGTGGTGGTGTTCCATCCCCTGTTGAAAGGGCAGATCCGGGCGA TTGCCAAACTTCAGATTGGCCATCTCCAGCAGCGACTGCGAGAGCGGGATATGGATTTAGCCGTGTCCGAAACTGCTCTG GATAAATTGGCAGAAGTGGGTTTCGATCCGGTTTATGGAGCTAGGCCCCTCAAGCGGGCGATTCAGCAACAAATCGAGAA CCCCCTAGCCCAGGAAATCCTAGGGGGAAAATTTGAGCCTGGGGATCTGATTGAAGTGGGAGTTGAAGGCGAACATTTCG TTTTCGAGCGCAAAGCAAGGGCAGCTTCTGCCGCCTAG Protein sequence : MRQDKLTTKFQEALADAQSLAVGQDHQFLEPLHVMFALLEQQGGTAAPLLMQAGVNVNNFHAQLSEALKRLPQVQGVPGE IHISQDLMRLLNVTDKLAQQRHDQYISSELFMLAAVEDRGQVGELLRKNGATKASIEAAINTIRGGRQVNEPGAEDQRQA LERYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNSEVPEGLKHRRLLAL DMGALIAGAKFRGEFEERLKAVLKDISKAEGNIILFIDELHTVVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEYR QYIEKDAALERRFQKVLVDEPSLEDTIAILRGLNERYEVHHGVEITDPAIVAAATLSHRYITDRKLPDKAIDLIDEAASR IRMEIDSKPEPMDRMERRLVQLKIEREALRKETDEASKKRLETLETEINHLEKEYADLEEIWKAEKAALSGAQGIKEKLE QARLELDSARRAGDLTRMSELQYGQIPELQKQLDAATAAEQQDFKLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREKLL KMEEALHRRVVGQEEAIEVVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALAAFLFDTEEAMVRIDMSEFMER HSVARLIGAPPGYVGFEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVVVMTSNL GSHVIQEMAGEEHYQEMKNAVMEIVGQHFRPEFINRVDDVVVFHPLLKGQIRAIAKLQIGHLQQRLRERDMDLAVSETAL DKLAEVGFDPVYGARPLKRAIQQQIENPLAQEILGGKFEPGDLIEVGVEGEHFVFERKARAASAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-174 | 44 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-108 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-106 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-106 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nhal_2318 | YP_003527793.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 4e-121 | 44 |
