Gene Information

Name : Nhal_2257 (Nhal_2257)
Accession : YP_003527732.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2332017 - 2332739 bp
Length : 723 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sfr:Sfri_1813 ABC transporter

DNA sequence :
ATGGCAATGACCCGAAAGCAGCTCAAACCGCCGTTGATTGCGCTTCGAGAGGTGACCAAAATCTATGGTACCGGCAGGGC
TGCTATGGAGGCACTGCGCGGCGTTAATCTTTCCATTGAGGCAGGGGATTTCGTGGCGGTGATGGGACCCAGTGGTTCCG
GAAAATCCACCTGTTTGAATATTCTTGGCTGTCTGGATACCCCCAGCAGGGGGGCTTATTTTTTCCAAGGGATCGAGGTG
GGCAGGCTATCCCGCAACCAGCGTGCCCGGTTGCGCCGTCACTATCTGGGATTCGTGTTTCAGGGCTTCAACTTGCTGAA
CCGCACCTCAGCCCTAGAAAATGTGGAGCTGCCCCTCATCTACCGAGGCATCCCGGCGGCAGTGCGCCATGCTTGGGCCC
GGAACGCCCTGGCGGCAGTGGGCTTAAATGGCTGGGAACACCACACCCCAGGCGAGCTTTCCGGTGGACAACAGCAGCGG
GTGGCCATTGCCCGAGCCATCGTGACCCAACCCCATGTGTTATTCGCCGATGAGCCCACCGGCAACCTGGACACAACCCG
TAGCCGGGAAATCATGGAACTGCTGACCACTTTCAATCGGGACCAGGGCATTACCATCGTCATGGTCACCCATGAAGCGG
ATATGGCCGCCTATGCCAAGCGCATCGTGCACTTTGTGGACGGGCGAGTGGCCTCTGACCAACGCCAAACGGAGGTGGCC
TAA

Protein sequence :
MAMTRKQLKPPLIALREVTKIYGTGRAAMEALRGVNLSIEAGDFVAVMGPSGSGKSTCLNILGCLDTPSRGAYFFQGIEV
GRLSRNQRARLRRHYLGFVFQGFNLLNRTSALENVELPLIYRGIPAAVRHAWARNALAAVGLNGWEHHTPGELSGGQQQR
VAIARAIVTQPHVLFADEPTGNLDTTRSREIMELLTTFNRDQGITIVMVTHEADMAAYAKRIVHFVDGRVASDQRQTEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nhal_2257 YP_003527732.1 ABC transporter NC_012469.1.7686878. Protein 4e-52 50
Nhal_2257 YP_003527732.1 ABC transporter NC_008702.1.4606598. Protein 2e-40 49
Nhal_2257 YP_003527732.1 ABC transporter CP001581.1.gene798.p Protein 6e-34 42
Nhal_2257 YP_003527732.1 ABC transporter CP001581.1.gene598.p Protein 8e-34 41