Gene Information

Name : Nhal_1898 (Nhal_1898)
Accession : YP_003527397.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 1958907 - 1959338 bp
Length : 432 bp
Strand : +
Note : PFAM: transposase IS200-family protein; KEGG: cps:CPS_1800 ISCps10, transposase

DNA sequence :
ATGCCAGACTACAAGAGTCTGAGCCATACGAAATGGGACTGCAAATACCATGTAGTTCTTATCCCTAAGAAGAGACAGAA
GTGGATTTACGGCAGCTTACGGAAATATTTGGGGGAGATTTTTCGCGAGTTAGCCAATCGCAGAGGGGTGGAGATAGTAG
AGGGGCATTTAATGAGAGACCATGTTTATATTTGCCTCAGTATACCTCCAAAGTATTCAGTTTCTCACGTGGTGGGCTAT
CTCAAGGGTAAGAGTGCCATTGCGATAGCGAGAAGATTTCGTGGAAAGCCAAGGAACTTCAATGGGGAACATTTCTGGGC
ACGAGGATATTTTGTGTCCACGGTAGGTCTCGATGAGAGGGTGGTGCGAGAGTACATTCGGAACCAAGAAAAGAATGATG
AGTATAGAGATCAGTTGAAGCTTGGTATGTGA

Protein sequence :
MPDYKSLSHTKWDCKYHVVLIPKKRQKWIYGSLRKYLGEIFRELANRRGVEIVEGHLMRDHVYICLSIPPKYSVSHVVGY
LKGKSAIAIARRFRGKPRNFNGEHFWARGYFVSTVGLDERVVREYIRNQEKNDEYRDQLKLGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 2e-24 47
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 3e-21 46
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 4e-21 46
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 8e-24 46
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 5e-23 42