Gene Information

Name : Nhal_1788 (Nhal_1788)
Accession : YP_003527296.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Virulence
Product : siderophore biosynthesis protein
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1670
EC number : -
Position : 1832741 - 1833739 bp
Length : 999 bp
Strand : +
Note : KEGG: abo:ABO_2090 siderophore biosynthesis protein

DNA sequence : 
ATGGCGGGTAATAAAGACATTACCGTACCCCTACCTTCGGGGCGGCAGTTGACGGTTGAACAGACTGGTACGGTGCAGCG
TTGCTTGTTGGAGGATAGACAATTACTCGGGGTGGAGGCGAATCCCGAACAGCCCCATAGGCTGCGGGTTTTCAGGACAC
CAGACTGTCTCAGTGCCCTGCGTTCAGCGAGCTATGCCCTGTTTGTCGGCAATCCCGCCGTAACCGTGCTGGTATTCGAC
AGGGCAGATGGCGTTTTAATTGATCCTGCCCTGATGTTTTGTCATGCCGCTCAGCAGTGGCACTTGTATCGGGATGCACT
TTGGCAGTGGCCGGAACTTTGGTTGCAAGGTCACTCTCACTCGGTGGCACCTACCATTTATAGGATGGGCGCAAATGGCC
ATTACCATCCGCTTCGGCCAGCTCGGCCGGAAGGGGAGGTGTATCGGCGGTTTGATTATCAACTGGGCGCTTGGGTTTCG
TTGCGTACTTTGGAGATTAACGAAGACTTGGAGCGGTTTCACCGTTGGCAAAACAGTGAGCGGGTGGCTTGTTTCTGGGA
GGAGCAGGGCACATTGGAACAGCACCAAGGCTATTTACAAAGGCTGTTCGATGATCCCCGAGTGCTTCCCTTGATTGGCT
GTATCAATAATGAGCCCTTTGCCTATTTTGAAGTCTATTGGGCGAAAGAAGACCGGATTGCCCCTTACTATCAGGCCGAT
GACTACGATCGGGGGATTCATATGCTGGTCGGAGAAGAAAGCCACCGCGGCCCCCATAAAGTGAAGGCTTGGTTAACGGC
TTTATGCCATTACCTTTTTCTCGATGATCCGCGTACTCAGCGTATTGTTTCTGAGCCGCGTTTTGATAATCAAAAAATGA
TTAGTTATTTGCAAGCGTATCGTTTTGCAAAGATCAAGGAGTTTGATTTTCCCCATAAACGAGCTTCCTTGATGATATTG
ACGCGGGAAGCGTTTTTTGATCGCTGCACCCTGGGCTAA

Protein sequence : 
MAGNKDITVPLPSGRQLTVEQTGTVQRCLLEDRQLLGVEANPEQPHRLRVFRTPDCLSALRSASYALFVGNPAVTVLVFD
RADGVLIDPALMFCHAAQQWHLYRDALWQWPELWLQGHSHSVAPTIYRMGANGHYHPLRPARPEGEVYRRFDYQLGAWVS
LRTLEINEDLERFHRWQNSERVACFWEEQGTLEQHQGYLQRLFDDPRVLPLIGCINNEPFAYFEVYWAKEDRIAPYYQAD
DYDRGIHMLVGEESHRGPHKVKAWLTALCHYLFLDDPRTQRIVSEPRFDNQKMISYLQAYRFAKIKEFDFPHKRASLMIL
TREAFFDRCTLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB AAK71632.1 IucB Virulence SHI-3 Protein 5e-51 43
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 9e-51 43
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-51 43
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-51 43
iucB AAD44747.1 IucB Virulence SHI-2 Protein 5e-51 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nhal_1788 YP_003527296.1 siderophore biosynthesis protein VFG1082 Protein 3e-51 43
Nhal_1788 YP_003527296.1 siderophore biosynthesis protein VFG0939 Protein 4e-51 43
Nhal_1788 YP_003527296.1 siderophore biosynthesis protein VFG0616 Protein 3e-51 43