Gene Information

Name : Nhal_1442 (Nhal_1442)
Accession : YP_003526980.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1464926 - 1465534 bp
Length : 609 bp
Strand : -
Note : PFAM: response regulator receiver; LuxR family transcriptional regulator; Sigma-70 region 4 type 2; SMART: response regulator receiver; LuxR family transcriptional regulator; KEGG: noc:Noc_1701 two component LuxR family transcriptional regulator

DNA sequence : 
ATGCTACCTGAAAACACGATATACATCGTGGATGACGACGATGCAATGCGTAAATCATTAGCTTTACTTTTAAAGGGAGA
AGGTTTTAATGTAAAGACCTATGCCTCTGCCCAGGCGTTCCTTGAGAGCGAGGAATCCCCATTCACGGGATGTATTTTGC
TCGATGTGCGGATGCCGGGTATGGATGGATTCGAGCTGCAAGAGCTGTTGCCGCAACGGGGGATTCACCTCCCTGTCATT
ATGATCACCGGCCATGCCGATGTCCCCATGGCAGTTCAAGCGATGAAATCGGGGGCTGAAGATTTCATCGAAAAACCTTT
TCGCGCCCAAGCTTTGTTAGACCGGATCCATAAAGCTTTATCCGAGGGGAATCACCAGGGACAGTTCCAAGATCCCCAGA
GGGAATTTTTAACCCAGCTTGAGTCTTTAACTAAACGAGAGCGACAAGTCTTCGAGCTGTTGGCAGAGGGCAAAATGAAC
AAACATATTGCCGCTGAACTGAGCATTAGTATCCGAACCGTCGAGGCTCATCGGGCCAAAGTCATGGAGAAGCTCAAAGC
AAAATCCTTAGCCGATCTGATCCGTTTAGCCATCTTAGAAAGATCTTAA

Protein sequence : 
MLPENTIYIVDDDDAMRKSLALLLKGEGFNVKTYASAQAFLESEESPFTGCILLDVRMPGMDGFELQELLPQRGIHLPVI
MITGHADVPMAVQAMKSGAEDFIEKPFRAQALLDRIHKALSEGNHQGQFQDPQREFLTQLESLTKRERQVFELLAEGKMN
KHIAAELSISIRTVEAHRAKVMEKLKAKSLADLIRLAILERS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 4e-31 43
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 4e-31 43
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 4e-31 43
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-31 43
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 4e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nhal_1442 YP_003526980.1 response regulator receiver VFG0488 Protein 1e-31 43